RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 PLXNB2O15031 1838 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 XKRY2A2RUG3 117 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 LIPT2A6NK58 231 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 SHISA8B8ZZ34 492 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 NHLRC1Q6VVB1 395 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 ADGRG7Q96K78 797 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 HPP00738 406 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 INHBBP09529 407 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 TNFRSF1AP19438 455 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 GLRX2Q9NS18 164 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 MPC1Q9Y5U8 109 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 AQP7O14520 342 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 OR3A4PP47883 348 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 C2CD4CQ8TF44 421 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 RPUSD4Q96CM3 377 aaKnown RBP11.14□□□□□ -0.63
COL4A6-209ENST00000545689 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
COL4A6-209ENST00000545689 PECRQ9BY49 303 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 CES1P1Q9UKY3 287 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
COL4A6-209ENST00000545689 MKRN2OSH3BPM6 223 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF766Q5HY98 468 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 ACER2Q5QJU3 275 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 RPL7L1Q6DKI1 246 aaKnown RBP11.13□□□□□ -0.63
COL4A6-209ENST00000545689 TMEM18Q96B42 140 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 SAT2Q96F10 170 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-209ENST00000545689 FAM60AQ9NP50 221 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 RASL12Q9NYN1 266 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 GPR37O15354 613 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF32P17041 273 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 RAB7AP51149 207 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 RPS16P62249 146 aaKnown RBP11.13□□□□□ -0.63
COL4A6-209ENST00000545689 CBLN3Q6UW01 205 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF768Q9H5H4 540 aaKnown RBP11.13□□□□□ -0.63
COL4A6-209ENST00000545689 BGLAPP02818 100 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 CST2P09228 141 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 SPP1P10451 314 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 ERGP11308 486 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 ATP6V1FQ16864 119 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 MRGPREQ86SM8 312 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF251Q9BRH9 671 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 FRRS1LQ9P0K9 344 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 OR2B8PP59922 312 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 RAC3P60763 192 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 FBLIM1Q8WUP2 373 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 PTX4Q96A99 478 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 AKR1C3P42330 323 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 DEFB109BQ30KR1 87 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF774Q6NX45 483 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 OR10V1Q8NGI7 309 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 UQCC1Q9NVA1 299 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF586Q9NXT0 402 aa11.13□□□□□ -0.63
COL4A6-209ENST00000545689 KIR2DL1P43626 348 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-209ENST00000545689 SLC37A1P57057 533 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 MIDNQ504T8 468 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 PABPC1L2AQ5JQF8 200 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF574Q6ZN55 896 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-209ENST00000545689 STPG2Q8N412 459 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 DEFB123Q8N688 67 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 OR10D3Q8NH80 312 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 PTP4A1Q93096 173 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 NRXN2Q9P2S2 1712 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 G3V3Q6 166 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 MEOX1P50221 254 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 KLF9Q13886 244 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-209ENST00000545689 GGNBP1Q5YKI7 109 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF429Q86V71 674 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 NEIL1Q96FI4 390 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-209ENST00000545689 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-209ENST00000545689 DNPH1O43598 174 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 MBPP02686 304 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-209ENST00000545689 AGFG1P52594 562 aaKnown RBP11.12□□□□□ -0.63
COL4A6-209ENST00000545689 LIMK1P53667 647 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 MOGAT2Q3SYC2 334 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 OR8B12Q8NGG6 310 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 OR8U1Q8NH10 309 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 OR5B3Q8NH48 314 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 NDFIP1Q9BT67 221 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 DVL1O14640 695 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 CHEK1O14757 476 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 CD226Q15762 336 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 C20orf196Q8IYI0 205 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 AKR1E2Q96JD6 320 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 NGFRP08138 427 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 CTRB1P17538 263 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 P2RY1P47900 373 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 CTRB2Q6GPI1 263 aa11.12□□□□□ -0.63
COL4A6-209ENST00000545689 GAR1Q9NY12 217 aaKnown RBP11.12□□□□□ -0.63
COL4A6-209ENST00000545689 UBE2L5PA0A1B0GUS4 154 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 OR4C45A6NMZ5 311 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 SOX15O60248 233 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 HRASP01112 189 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 NGFP01138 241 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 CELA2BP08218 269 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-209ENST00000545689 FBP1P09467 338 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 MYF5P13349 255 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 RAB32Q13637 225 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 VMA21Q3ZAQ7 101 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 SLC52A3Q9NQ40 469 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 COX7A2P2O60397 106 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms