RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ZFAND2BQ8WV99 257 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 RNF166Q96A37 237 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-216ENST00000544996 VCXQ9H320 206 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 CNTD2Q9H8S5 307 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 ZNF69Q9UC07 566 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 RPUSD1Q9UJJ7 312 aaKnown RBP13.03□□□□□ -0.32
CCDC78-216ENST00000544996 HHLA2Q9UM44 414 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 ARHGAP32A7KAX9 2087 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 IGHV3OR16-10A0A075B7F0 116 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 TRAV40A0A0B4J280 105 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 A0A1B0GW55 424 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 TRIM77I1YAP6 450 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 SYNGR1O43759 233 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 NOS1APO75052 506 aaPredicted RBP13.02□□□□□ -0.33
CCDC78-216ENST00000544996 WBP4O75554 376 aaKnown RBP13.02□□□□□ -0.33
CCDC78-216ENST00000544996 CLIC3O95833 236 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 ACAA1P09110 424 aaPredicted RBP13.02□□□□□ -0.33
CCDC78-216ENST00000544996 OCM2P0CE71 109 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 OCMP0CE72 109 aaPredicted RBP13.02□□□□□ -0.33
CCDC78-216ENST00000544996 DUX4L2P0CJ85 424 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 DUX4L3P0CJ86 424 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 DUX4L4P0CJ87 422 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 DUX4L5P0CJ88 424 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 DUX4L6P0CJ89 424 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 DUX4L7P0CJ90 424 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 ZNF20P17024 532 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 AMY2BP19961 511 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 BPIFB3P59826 476 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 IL18R1Q13478 541 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 ALKBH1Q13686 389 aaKnown RBP13.02□□□□□ -0.33
CCDC78-216ENST00000544996 CNN3Q15417 329 aaKnown RBP13.02□□□□□ -0.33
CCDC78-216ENST00000544996 UBE2V2Q15819 145 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 GPR157Q5UAW9 335 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 DUX4L9Q6RFH8 374 aaPredicted RBP13.02□□□□□ -0.33
CCDC78-216ENST00000544996 ZNF676Q8N7Q3 588 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 HAVCR2Q8TDQ0 301 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 NPRL2Q8WTW4 380 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 BORCS8Q96FH0 119 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 DMRTB1Q96MA1 342 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 WDFY2Q96P53 400 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 PCGF1Q9BSM1 259 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 PKIBQ9C010 78 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 DCLRE1BQ9H816 532 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 ISG20L2Q9H9L3 353 aaKnown RBP13.02□□□□□ -0.33
CCDC78-216ENST00000544996 DUX4Q9UBX2 424 aa13.02□□□□□ -0.33
CCDC78-216ENST00000544996 SLC25A10Q9UBX3 287 aaPredicted RBP13.02□□□□□ -0.33
CCDC78-216ENST00000544996 WNK2Q9Y3S1 2297 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 CASQ2O14958 399 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-216ENST00000544996 SIGLEC5O15389 551 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 FCN3O75636 299 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 NXPH2O95156 264 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 PGA5P0DJD9 388 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 IGHV4-38-2P0DP08 117 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 PSG2P11465 335 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 MPZP25189 248 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 DCKP27707 260 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 GBX2P52951 348 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-216ENST00000544996 ARF6P62330 175 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 ADARB1P78563 741 aaKnown RBP13.01□□□□□ -0.33
CCDC78-216ENST00000544996 IL24Q13007 206 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 SMN1Q16637 294 aaKnown RBP13.01□□□□□ -0.33
CCDC78-216ENST00000544996 OGFRL1Q5TC84 451 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-216ENST00000544996 ACP7Q6ZNF0 438 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 ANGPTL5Q86XS5 388 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 CMTM4Q8IZR5 234 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 OR13C3Q8NGS6 347 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 CNIH3Q8TBE1 160 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 H1FXQ92522 213 aaKnown RBP13.01□□□□□ -0.33
CCDC78-216ENST00000544996 FGGYQ96C11 551 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 GAFA1Q96PS6 74 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 NRIP2Q9BQI9 281 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 FGF20Q9NP95 211 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-216ENST00000544996 HSPE1-MOB4S4R3N1 261 aa13.01□□□□□ -0.33
CCDC78-216ENST00000544996 COL6A5A8TX70 2615 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 IGKV1D-17A0A075B6S4 117 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 TMEM212A6NML5 194 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 OR4C45A6NMZ5 311 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 H0YAE9 185 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 PLATP00750 562 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 SFTPBP07988 381 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 CCDC159P0C7I6 412 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 NDUFB7P17568 137 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 MYL12AP19105 171 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 PRKACBP22694 351 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 RBP2P50120 134 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 PDCD1Q15116 288 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 DGUOKQ16854 277 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 TMPRSS11AQ6ZMR5 421 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 C9orf139Q6ZV77 190 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 UTS2BQ765I0 119 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 CALHM1Q8IU99 346 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 BCL6BQ8N143 479 aaPredicted RBP13□□□□□ -0.33
CCDC78-216ENST00000544996 FGFRL1Q8N441 504 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 SIGLECL1Q8N7X8 197 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 LY6G5BQ8NDX9 201 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 DNAAF1Q8NEP3 725 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 TMEM185AQ8NFB2 350 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 ADAT3Q96EY9 351 aaPredicted RBP13□□□□□ -0.33
CCDC78-216ENST00000544996 ZNF488Q96MN9 340 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 ZNF649Q9BS31 505 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms