RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 LYPD6Q86Y78 171 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 TMEM123Q8N131 208 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 METTL27Q8N6F8 245 aaPredicted RBP11.17□□□□□ -0.62
SMG8-202ENST00000543872 OR51E1Q8TCB6 317 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 ZNF385AQ96PM9 386 aaKnown RBP11.17□□□□□ -0.62
SMG8-202ENST00000543872 AK3Q9UIJ7 227 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 ARHGEF17Q96PE2 2063 aaPredicted RBP11.17□□□□□ -0.62
SMG8-202ENST00000543872 FAM221AA4D161 298 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 TMEM14DPA8MWL7 114 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 M0R143 59 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 RRP8O43159 456 aaKnown RBP11.17□□□□□ -0.62
SMG8-202ENST00000543872 HCRTR1O43613 425 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 GSTP1P09211 210 aaKnown RBP11.17□□□□□ -0.62
SMG8-202ENST00000543872 GLIPR1P48060 266 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 LYZL2Q7Z4W2 148 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 C1orf87Q8N0U7 546 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 SVIPQ8NHG7 77 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 FAM71F1Q96KD3 344 aaPredicted RBP11.17□□□□□ -0.62
SMG8-202ENST00000543872 RNF186Q9NXI6 227 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 TGFBR3LH3BV60 316 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 LINC00614P0C842 121 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 FUT3P21217 361 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 BLVRBP30043 206 aaPredicted RBP11.17□□□□□ -0.62
SMG8-202ENST00000543872 DRD3P35462 400 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 ALDH3B1P43353 468 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
SMG8-202ENST00000543872 PSRC1Q6PGN9 363 aaPredicted RBP11.17□□□□□ -0.62
SMG8-202ENST00000543872 KLHL24Q6TFL4 600 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 FAM180AQ6UWF9 173 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 RABEPKQ7Z6M1 372 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 CUTCQ9NTM9 273 aa11.17□□□□□ -0.62
SMG8-202ENST00000543872 A6NIZ1 184 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 TCF21O43680 179 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 GPR137BO60478 399 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 CDC14BO60729 498 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 SCGNO76038 276 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 AMBPP02760 352 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 BGLAPP02818 100 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 HLA-DOBP13765 273 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 MMP9P14780 707 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 CSF2RAP15509 400 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 FXYD4P59646 89 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 RAP1BP61224 184 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 GRASPQ7Z6J2 395 aaPredicted RBP11.16□□□□□ -0.62
SMG8-202ENST00000543872 CCNL2Q96S94 520 aaPredicted RBP11.16□□□□□ -0.62
SMG8-202ENST00000543872 ADOQ96SZ5 270 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 VN1R1Q9GZP7 353 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 KIR3DX1Q9H7L2 352 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 NOTCH4Q99466 2003 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.16□□□□□ -0.62
SMG8-202ENST00000543872 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.16□□□□□ -0.62
SMG8-202ENST00000543872 FOXS1O43638 330 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 RABIFP47224 123 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 RAB11AP62491 216 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 RPL23AP62750 156 aaKnown RBP11.16□□□□□ -0.62
SMG8-202ENST00000543872 FZD2Q14332 565 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 FBXW12Q6X9E4 464 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 LHFPL1Q86WI0 220 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 SUMF1Q8NBK3 374 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 NEK7Q8TDX7 302 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 DGAT2Q96PD7 388 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 OR10A5Q9H207 317 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 S1PR5Q9H228 398 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMG8-202ENST00000543872 MYO7BQ6PIF6 2116 aa11.16□□□□□ -0.62
SMG8-202ENST00000543872 CDC14CA4D256 554 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 FAM24AA6NFZ4 105 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 K7N7A8 449 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 TTRP02766 147 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 PHLDA2Q53GA4 152 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 ZNF440Q8IYI8 595 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 SLC26A10Q8NG04 563 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 KCNG3Q8TAE7 436 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 DAZLQ92904 295 aaKnown RBP11.15□□□□□ -0.62
SMG8-202ENST00000543872 TSACCQ96A04 125 aaPredicted RBP11.15□□□□□ -0.62
SMG8-202ENST00000543872 WFIKKN1Q96NZ8 548 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 ARV1Q9H2C2 271 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 PITPNC1Q9UKF7 332 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 SLC7A11Q9UPY5 501 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 GAB2Q9UQC2 676 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 IGKV1D-8A0A087WSZ0 117 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 NSG1A0A0A6YYJ2 146 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 HSPA12AO43301 675 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 ATP6V0CP27449 155 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 SEC13P55735 322 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 SLC37A1P57057 533 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 C1orf189Q5VU69 101 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 OR52M1Q8NGK5 317 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 OR14C36Q8NHC7 312 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 LIPHQ8WWY8 451 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 PATE1Q8WXA2 126 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 SRPK3Q9UPE1 567 aa11.15□□□□□ -0.62
SMG8-202ENST00000543872 TAS2R46P59540 309 aa11.15□□□□□ -0.63
SMG8-202ENST00000543872 NECAP1Q8NC96 275 aa11.15□□□□□ -0.63
SMG8-202ENST00000543872 RNASE8Q8TDE3 154 aaKnown RBP11.15□□□□□ -0.63
SMG8-202ENST00000543872 HDHD3Q9BSH5 251 aaPredicted RBP11.15□□□□□ -0.63
SMG8-202ENST00000543872 CABLES2Q9BTV7 478 aa11.15□□□□□ -0.63
SMG8-202ENST00000543872 CEACAM18A8MTB9 384 aa11.14□□□□□ -0.63
SMG8-202ENST00000543872 HIDE1A8MVS5 230 aa11.14□□□□□ -0.63
SMG8-202ENST00000543872 SUCLG1P53597 346 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms