RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 PLECQ15149 4684 aaKnown RBP3.73□□□□□ -1.81
LIMS1-214ENST00000542845 IGKV1D-17A0A075B6S4 117 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 PRSS37A4D1T9 235 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 NPIPB13A6NJU9 1138 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 EVPLLA8MZ36 301 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 NPIPB4C9JG80 1138 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 J3KTA2 159 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 M0R135 149 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 SOCS2O14508 198 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 POLR3GO15318 223 aaPredicted RBP3.73□□□□□ -1.81
LIMS1-214ENST00000542845 PTP4A3O75365 173 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 OR2F2O95006 317 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 HLA-DQA2P01906 255 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 BPGMP07738 259 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 SPARCP09486 303 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 TSPAN19P0C672 248 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 SLC2A1P11166 492 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 PSG2P11465 335 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ANOS1P23352 680 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 SLC6A1P30531 599 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 MDH1P40925 334 aaKnown RBP3.73□□□□□ -1.81
LIMS1-214ENST00000542845 SLC1A6P48664 564 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 DYNLT3P51808 116 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 PRKXP51817 358 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ACTA2P62736 377 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ACTG2P63267 376 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ACTC1P68032 377 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ACTA1P68133 377 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 HIST1H3AP68431 136 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 SPIBQ01892 262 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 GABPB1Q06547 395 aaPredicted RBP3.73□□□□□ -1.81
LIMS1-214ENST00000542845 NFYCQ13952 458 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 KIR2DS1Q14954 304 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 SNAPC1Q16533 368 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 HAGHQ16775 308 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 MESTQ5EB52 335 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 HIST2H3PS2Q5TEC6 136 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 AGBL2Q5U5Z8 902 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ZNF626Q68DY1 528 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ZNF770Q6IQ21 691 aaPredicted RBP3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ACP7Q6ZNF0 438 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 HIST2H3AQ71DI3 136 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 CCDC80Q76M96 950 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 C16orf82Q7Z2V1 217 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 OR11H1Q8NG94 326 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 OR9I1Q8NGQ6 314 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 GTF2H4Q92759 462 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 SPTSSAQ969W0 71 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 BPIFA2Q96DR5 249 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ZNF799Q96GE5 643 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 RBM14Q96PK6 669 aaKnown RBP3.73□□□□□ -1.81
LIMS1-214ENST00000542845 OR5B12Q96R08 314 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 OR14A2Q96R54 314 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 MICU1Q9BPX6 476 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ZNF426Q9BUY5 554 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 TMED9Q9BVK6 235 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 C20orf27Q9GZN8 174 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 KRCC1Q9NPI7 259 aaPredicted RBP3.73□□□□□ -1.81
LIMS1-214ENST00000542845 PAPOLBQ9NRJ5 636 aaKnown RBP3.73□□□□□ -1.81
LIMS1-214ENST00000542845 KRT84Q9NSB2 600 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 KIAA1456Q9P272 454 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 ATPIF1Q9UII2 106 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 OAZ3Q9UMX2 235 aa3.73□□□□□ -1.81
LIMS1-214ENST00000542845 SORL1Q92673 2214 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 CXorf65A6NEN9 183 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 C9orf118A6NHY6 69 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 ANXA2P2A6NMY6 339 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 FAM90A22PA8MWA6 464 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 ODF3BA8MYP8 253 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 EFCAB9A8MZ26 197 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 SLC1A7O00341 560 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 SDHDO14521 159 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 OR5F1O95221 314 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 TROVE2P10155 538 aaKnown RBP eCLIP3.72□□□□□ -1.81
LIMS1-214ENST00000542845 IDO1P14902 403 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 CNTFRP26992 372 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 HTR1DP28221 377 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 RBM34P42696 430 aaKnown RBP3.72□□□□□ -1.81
LIMS1-214ENST00000542845 OR1E2P47887 323 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 INSL3P51460 131 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 PTTG1IPP53801 180 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 EDDM3BP56851 147 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 CKAP4Q07065 602 aaKnown RBP3.72□□□□□ -1.81
LIMS1-214ENST00000542845 IL18R1Q13478 541 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 KRR1Q13601 381 aaKnown RBP3.72□□□□□ -1.81
LIMS1-214ENST00000542845 HES1Q14469 280 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 TAF13Q15543 124 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 CYP51A1Q16850 503 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 CXorf66Q5JRM2 361 aaPredicted RBP3.72□□□□□ -1.81
LIMS1-214ENST00000542845 GPR139Q6DWJ6 353 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 OGFOD2Q6N063 350 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 NANOGP8Q6NSW7 305 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 MZT2BQ6NZ67 158 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 TEX38Q6PEX7 206 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 MAVSQ7Z434 540 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 SLC35E3Q7Z769 313 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 HAPLN4Q86UW8 402 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 ZNF429Q86V71 674 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 SGPP2Q8IWX5 399 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 MSRB3Q8IXL7 192 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms