RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-211	ENST00000541687	MPPED2	Q15777	294 aa		12.82	□□□□□ -0.36
GCFC2-211	ENST00000541687	RSPO4	Q2I0M5	234 aa	Predicted RBP	12.82	□□□□□ -0.36
GCFC2-211	ENST00000541687	ZNF501	Q96CX3	271 aa	Predicted RBP	12.82	□□□□□ -0.36
GCFC2-211	ENST00000541687	KLHDC3	Q9BQ90	382 aa		12.82	□□□□□ -0.36
GCFC2-211	ENST00000541687	MESP1	Q9BRJ9	268 aa		12.82	□□□□□ -0.36
GCFC2-211	ENST00000541687	RTN4R	Q9BZR6	473 aa		12.82	□□□□□ -0.36
GCFC2-211	ENST00000541687	SPACA1	Q9HBV2	294 aa		12.82	□□□□□ -0.36
GCFC2-211	ENST00000541687	KCNK7	Q9Y2U2	307 aa		12.82	□□□□□ -0.36
GCFC2-211	ENST00000541687	MEX3A	A1L020	520 aa	Known RBP	12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	NPIPB9	F8W1W9	429 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	CBR3	O75828	277 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	ZNF32	P17041	273 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	GALNS	P34059	522 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	NKX2-1	P43699	371 aa	Predicted RBP	12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	MMP16	P51512	607 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	CLEC18B	Q6UXF7	455 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	NANOS1	Q8WY41	292 aa	Known RBP	12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	HTT	P42858	3142 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	LOC101059948	A0A1B0GTJ6	334 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	TUSC2	O75896	110 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	RAB11A	P62491	216 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	WDR5B	Q86VZ2	330 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	OR2G3	Q8NGZ4	309 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	PP6455	Q8WZ26	134 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	MTCH2	Q9Y6C9	303 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	POLE	Q07864	2286 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	TRIM77	I1YAP6	450 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	GRP	P07492	148 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	KITLG	P21583	273 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	SPATA46	Q5T0L3	261 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	DPPA2	Q7Z7J5	298 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	SLC25A45	Q8N413	288 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	BVES	Q8NE79	360 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	FOXB1	Q99853	325 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	FAM234A	Q9H0X4	552 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	RHOF	Q9HBH0	211 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	HSBP1L1	C9JCN9	74 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	DHRS3	O75911	302 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	FKBP2	P26885	142 aa	Known RBP	12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	SST	P61278	116 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	C2orf68	Q2NKX9	166 aa		12.81	□□□□□ -0.36
GCFC2-211	ENST00000541687	SERPINE3	A8MV23	424 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	MPPED1	O15442	326 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	SSSCA1	O60232	199 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	JTB	O76095	146 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	CCL3	P10147	92 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	EPHA8	P29322	1005 aa	Predicted RBP	12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	ARSJ	Q5FYB0	599 aa	Predicted RBP	12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	RPL7L1	Q6DKI1	246 aa	Known RBP	12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	NUBPL	Q8TB37	319 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	ZNF385A	Q96PM9	386 aa	Known RBP	12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	HDHD3	Q9BSH5	251 aa	Predicted RBP	12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	DEFB127	Q9H1M4	99 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687		J3QRE1	110 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	SFT2D2	O95562	160 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	CD1A	P06126	327 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	DSCR4	P56555	118 aa	Predicted RBP	12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	HAGH	Q16775	308 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	OR2B11	Q5JQS5	317 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	OSR2	Q8N2R0	312 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	APH1A	Q96BI3	265 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	PLSCR5	A0PG75	271 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	ZNF724	A8MTY0	619 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	PATE3	B3GLJ2	98 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	WDR1	O75083	606 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	CST7	O76096	145 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	FPR2	P25090	351 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	C4orf17	Q53FE4	359 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	OR8G2P	Q6IF36	304 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	NAA40	Q86UY6	237 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	OR1F12	Q8NHA8	337 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	AKR1E2	Q96JD6	320 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	ADAT1	Q9BUB4	502 aa	Known RBP	12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	PLA2G3	Q9NZ20	509 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	RPH3AL	Q9UNE2	315 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	ANAPC1	Q9H1A4	1944 aa		12.8	□□□□□ -0.36
GCFC2-211	ENST00000541687	TRBV5-7	A0A0A0MS05	114 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	CRH	P06850	196 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	IRF2	P14316	349 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	THBS4	P35443	961 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	ZNF808	Q8N4W9	903 aa	Predicted RBP	12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	ZFP62	Q8NB50	900 aa	Predicted RBP	12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	DYRK2	Q92630	601 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	C12orf57	Q99622	126 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	DOCK8	Q8NF50	2099 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	MS4A18	H0YCH9	400 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	HPN	P05981	417 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	PLGLA	Q15195	96 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	PNLIPRP3	Q17RR3	467 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	MS4A18	Q3C1V0	323 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	OR6X1	Q8NH79	312 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	PLK3	Q9H4B4	646 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	RAB27B	O00194	218 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	NXPH2	O95156	264 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	HIST2H3A	Q71DI3	136 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	TMEM123	Q8N131	208 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	PPP1R35	Q8TAP8	253 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	GNG12	Q9UBI6	72 aa		12.79	□□□□□ -0.36
GCFC2-211	ENST00000541687	F12	P00748	615 aa	Predicted RBP	12.79	□□□□□ -0.36

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