RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 MPZP25189 248 aa15.12■□□□□ 0.01
CLIP1-215ENST00000541108 TAS2R20P59543 309 aa15.12■□□□□ 0.01
CLIP1-215ENST00000541108 RPS27AP62979 156 aaKnown RBP15.12■□□□□ 0.01
CLIP1-215ENST00000541108 SCN1BQ07699 218 aa15.12■□□□□ 0.01
CLIP1-215ENST00000541108 MZT1Q08AG7 82 aa15.12■□□□□ 0.01
CLIP1-215ENST00000541108 MADCAM1Q13477 382 aa15.12■□□□□ 0.01
CLIP1-215ENST00000541108 BEX5Q5H9J7 111 aa15.12■□□□□ 0.01
CLIP1-215ENST00000541108 STEAP3Q658P3 488 aa15.12■□□□□ 0.01
CLIP1-215ENST00000541108 SNX29P2Q8IUI4 249 aa15.12■□□□□ 0.01
CLIP1-215ENST00000541108 DVL3Q92997 716 aaPredicted RBP15.12■□□□□ 0.01
CLIP1-215ENST00000541108 MRPL24Q96A35 216 aaKnown RBP15.12■□□□□ 0.01
CLIP1-215ENST00000541108 TM2D1Q9BX74 207 aa15.12■□□□□ 0.01
CLIP1-215ENST00000541108 C14orf119Q9NWQ9 140 aa15.12■□□□□ 0.01
CLIP1-215ENST00000541108 IGKV1-12A0A0C4DH73 117 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 LRP5LA4QPB2 252 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 MLNRO43193 412 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 GSTZ1O43708 216 aaPredicted RBP15.11■□□□□ 0.01
CLIP1-215ENST00000541108 ANGPTL7O43827 346 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 IGKV1D-12P01611 117 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 SERPINA2P20848 420 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 IL24Q13007 206 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 VHLLQ6RSH7 139 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 SLC25A26Q70HW3 274 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 IZUMO1Q8IYV9 350 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 OR56B1Q8NGI3 324 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 PLPPR2Q96GM1 343 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 THAP7Q9BT49 309 aaPredicted RBP15.11■□□□□ 0.01
CLIP1-215ENST00000541108 RHOFQ9HBH0 211 aa15.11■□□□□ 0.01
CLIP1-215ENST00000541108 TRAV18A0A075B6X5 111 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.1■□□□□ 0.01
CLIP1-215ENST00000541108 A0A1W2PP11 408 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 PLSCR5A0PG75 271 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 GABARAPH6UMI1 98 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 AKR7A2O43488 359 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 PLATP00750 562 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 CD3EP07766 207 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 CPT2P23786 658 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 HACD4Q5VWC8 232 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 ELP2Q6IA86 826 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 Q6ZR03 302 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 LRP11Q86VZ4 500 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 OR10R2Q8NGX6 335 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 SMIM4Q8WVI0 70 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 CXXC4Q9H2H0 198 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 BANF2Q9H503 90 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 POU2F3Q9UKI9 436 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 ATP23Q9Y6H3 246 aa15.1■□□□□ 0.01
CLIP1-215ENST00000541108 SHISA9B4DS77 424 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 C1QL1O75973 258 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 HTR3BO95264 441 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 VEGFCP49767 419 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 SNTB1Q13884 538 aaKnown RBP15.09■□□□□ 0.01
CLIP1-215ENST00000541108 TRIQKQ629K1 86 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 HAGHLQ6PII5 290 aaPredicted RBP15.09■□□□□ 0.01
CLIP1-215ENST00000541108 DNM1P46Q6ZS02 220 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 OR10K1Q8NGX5 313 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 MRPL37Q9BZE1 423 aaKnown RBP15.09■□□□□ 0.01
CLIP1-215ENST00000541108 SELENOIQ9C0D9 397 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 MSL2Q9HCI7 577 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 NPDC1Q9NQX5 325 aaPredicted RBP15.09■□□□□ 0.01
CLIP1-215ENST00000541108 PRSS44E7EML9 344 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 H0YL77 283 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 J3QT63 122 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 SFTPBP07988 381 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 ACAA1P09110 424 aaPredicted RBP15.09■□□□□ 0.01
CLIP1-215ENST00000541108 DEFA1P59665 94 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 DEFA3P59666 94 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 RGS21Q2M5E4 152 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 MOGAT2Q3SYC2 334 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 ADAM5Q6NVV9 412 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 OSR2Q8N2R0 312 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 ACBD4Q8NC06 268 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 C19orf18Q8NEA5 215 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 OR51T1Q8NGJ9 327 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 SETD6Q8TBK2 473 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 FCAMRQ8WWV6 532 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 Q96M66 194 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 SYT3Q9BQG1 590 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 POLDIP2Q9Y2S7 368 aa15.09■□□□□ 0.01
CLIP1-215ENST00000541108 PLCE1Q9P212 2302 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 A0A1W2PQ09 198 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 TRAPPC2LH3BP13 241 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 SULT1C2O00338 296 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 MELTFP08582 738 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 ZNF154Q13106 437 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 MAB21L1Q13394 359 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 ARL6IP1Q15041 203 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 ADIPOQQ15848 244 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 WDR86Q86TI4 376 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 DMRTC2Q8IXT2 367 aaPredicted RBP15.08■□□□□ 0
CLIP1-215ENST00000541108 SCCPDHQ8NBX0 429 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 AQP3Q92482 292 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 YIPF5Q969M3 257 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 TRIM63Q969Q1 353 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 GAL3ST1Q99999 423 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 NICN1Q9BSH3 213 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 TLNRD1Q9H1K6 362 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 PLK3Q9H4B4 646 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 AUNIPQ9H7T9 357 aa15.08■□□□□ 0
CLIP1-215ENST00000541108 MTCH1Q9NZJ7 389 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms