RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	NICN1	Q9BSH3	213 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ABHD6	Q9BV23	337 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	MRPL22	Q9NWU5	206 aa	Known RBP	4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SLC5A6	Q9Y289	635 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	LRP12	Q9Y561	859 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	FREM3	P0C091	2139 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	LOC107986453	A0A1B0GWG9	222 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783		A0A1W2PPE2	198 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	C7orf77	A4D0Y5	90 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783		A8MVM7	634 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	NME2P1	O60361	137 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TMEM127	O75204	238 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	DUS4L	O95620	317 aa	Known RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TNFSF10	P50591	281 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	HGFAC	Q04756	655 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	MEF2D	Q14814	521 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TMEM176B	Q3YBM2	270 aa	Predicted RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF260	Q3ZCT1	412 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	AWAT1	Q58HT5	328 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ATP1A1-AS1	Q5TC04	95 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783		Q6ZRG5	221 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ATG4D	Q86TL0	474 aa	Predicted RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF679	Q8IYX0	411 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CNEP1R1	Q8N9A8	125 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR52N4	Q8NGI2	321 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR4K15	Q8NH41	348 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	AKR7L	Q8NHP1	331 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RND1	Q92730	232 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CPNE4	Q96A23	557 aa	Predicted RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	MUCL1	Q96DR8	90 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF587	Q96SQ5	575 aa	Predicted RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	PAPOLG	Q9BWT3	736 aa	Known RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ANGPTL4	Q9BY76	406 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RTN4R	Q9BZR6	473 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR51M1	Q9H341	326 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TAF9B	Q9HBM6	251 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TMEM14A	Q9Y6G1	99 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TMED7-TICAM2	A0A0A6YYA0	188 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	AHRR	A9YTQ3	701 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	UBE2C	O00762	179 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	MT-ATP6	P00846	226 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	S100A8	P05109	93 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	HEXA	P06865	529 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR8U8	P0C7N1	319 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	EDN3	P14138	238 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ACKR3	P25106	362 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	FHIT	P49789	147 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	DAP3	P51398	398 aa	Known RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RIDA	P52758	137 aa	Known RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SCAND1	P57086	179 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	UNC119	Q13432	240 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF141	Q15928	474 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ACKR1	Q16570	336 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ANKRD55	Q3KP44	614 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SLC18B1	Q6NT16	456 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RPUSD3	Q6P087	351 aa	Known RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CLEC18B	Q6UXF7	455 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	IL34	Q6ZMJ4	242 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	YRDC	Q86U90	279 aa	Known RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF321P	Q8N8H1	164 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	PNLDC1	Q8NA58	520 aa	Known RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR13C9	Q8NGT0	318 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR2V1	Q8NHB1	315 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CD300LF	Q8TDQ1	290 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	PFDN5	Q99471	154 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	BANF2	Q9H503	90 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF552	Q9H707	407 aa	Predicted RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SPACA1	Q9HBV2	294 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	MYOZ1	Q9NP98	299 aa	Predicted RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CACFD1	Q9UGQ2	172 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RP1	P56715	2156 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	KIF26B	Q2KJY2	2108 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TRAV36DV7	A0A075B6V5	113 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783		A0A1W2PP11	408 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	METTL21EP	A6NDL7	271 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	NPIPB9	F8W1W9	429 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ATXN7	O15265	892 aa	Predicted RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	C1QL1	O75973	258 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	KNG1	P01042	644 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ASAH2B	P0C7U1	165 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RNF224	P0DH78	156 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF17	P17021	662 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	HLA-G	P17693	338 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	GLRA1	P23415	457 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	S100P	P25815	95 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SSBP1	Q04837	148 aa	Known RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF616	Q08AN1	781 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SKP2	Q13309	424 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RNPS1	Q15287	305 aa	Known RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SPINK14	Q6IE38	97 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	C9orf40	Q8IXQ3	194 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF101	Q8IZC7	436 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF561	Q8N587	486 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TMEM104	Q8NE00	496 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	AQP3	Q92482	292 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RHOV	Q96L33	236 aa		4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	GPX7	Q96SL4	187 aa	Predicted RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	EIF5A2	Q9GZV4	153 aa	Known RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.98	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SLC17A5	Q9NRA2	495 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms