RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PRDM13Q9H4Q3 707 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 Q9N2J8 555 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 ZNF701Q9NV72 531 aaPredicted RBP7.71□□□□□ -1.18
DDB1-217ENST00000540166 PRR19A6NJB7 356 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 C11orf98E9PRG8 122 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 M0QZK8 103 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 NTN3O00634 580 aaPredicted RBP7.71□□□□□ -1.18
DDB1-217ENST00000540166 DOK2O60496 412 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 GGCTO75223 188 aaKnown RBP7.71□□□□□ -1.18
DDB1-217ENST00000540166 DXOO77932 396 aaKnown RBP7.71□□□□□ -1.18
DDB1-217ENST00000540166 FCGR3AP08637 254 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 TRGC1P0CF51 173 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 SNCAP37840 140 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 DLK1P80370 383 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 GLO1Q04760 184 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 FAM189A2Q15884 450 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 MESTQ5EB52 335 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 GFI1BQ5VTD9 330 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 ZNF343Q6P1L6 599 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 HEPN1Q6WQI6 88 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 OR52R1Q8NGF1 315 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 OR51A4Q8NGJ6 313 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 ZNF764Q96H86 408 aaPredicted RBP7.71□□□□□ -1.18
DDB1-217ENST00000540166 COX14Q96I36 57 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 AQP10Q96PS8 301 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 PLEKHA2Q9HB19 425 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 STARD5Q9NSY2 213 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 EHFQ9NZC4 300 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 SH3BGRL2Q9UJC5 107 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 SLC22A13Q9Y226 551 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 THY1P04216 161 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 LSM6P62312 80 aaKnown RBP7.7□□□□□ -1.18
DDB1-217ENST00000540166 TAF9Q16594 264 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 CDCP2Q5VXM1 449 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 BTNL8Q6UX41 500 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 WDR88Q6ZMY6 472 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 SULF2Q8IWU5 870 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 OR2G3Q8NGZ4 309 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 CT55Q8WUE5 264 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 G6PC3Q9BUM1 346 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 CBLN4Q9NTU7 201 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 NXT1Q9UKK6 140 aaKnown RBP7.7□□□□□ -1.18
DDB1-217ENST00000540166 ZNF292O60281 2723 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 NSG1A0A0A6YYJ2 146 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 C9JQL5 133 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 TCF21O43680 179 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 SFT2D2O95562 160 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 GPR75O95800 540 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 TBPP20226 339 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 ALOX5APP20292 161 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 ZNF136P52737 540 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 RAB11AP62491 216 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 NKAIN1Q4KMZ8 207 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HLA-DQA1Q5Y7H0 255 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 CMBLQ96DG6 245 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 PRSS27Q9BQR3 290 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 NUDT9Q9BW91 350 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 MRPL22Q9NWU5 206 aaKnown RBP7.7□□□□□ -1.18
DDB1-217ENST00000540166 ALKBH4Q9NXW9 302 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 MRM2Q9UI43 246 aaKnown RBP7.7□□□□□ -1.18
DDB1-217ENST00000540166 DAPP1Q9UN19 280 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 IGKV1-8A0A0C4DH67 115 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 MARCH11A6NNE9 402 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 C4orf51C9J302 202 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 PPP5D1E7EU14 171 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST1H2BKO60814 126 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST1H2BJP06899 126 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 GNB3P16520 340 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST1H2BOP23527 126 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST1H2BBP33778 126 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST1H2BDP58876 126 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST1H2BCP62807 126 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 TLE4Q04727 773 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 TOMM20Q15388 145 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST2H2BEQ16778 126 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 MST1LQ2TV78 715 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.7□□□□□ -1.18
DDB1-217ENST00000540166 FHL5Q5TD97 284 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 DMRTA1Q5VZB9 504 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 CLEC18BQ6UXF7 455 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 LINC00696Q6ZRV3 163 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 TMEM156Q8N614 296 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST1H2BHQ93079 126 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 FAM131CQ96AQ9 280 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 GALNT14Q96FL9 552 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 C5orf34Q96MH7 638 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 MOGAT1Q96PD6 335 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST1H2BNQ99877 126 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 HIST1H2BMQ99879 126 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 URM1Q9BTM9 101 aaKnown RBP7.7□□□□□ -1.18
DDB1-217ENST00000540166 ZNF107Q9UII5 783 aaPredicted RBP7.7□□□□□ -1.18
DDB1-217ENST00000540166 C19orf53Q9UNZ5 99 aaPredicted RBP7.7□□□□□ -1.18
DDB1-217ENST00000540166 WSB1Q9Y6I7 421 aa7.7□□□□□ -1.18
DDB1-217ENST00000540166 ARHGEF17Q96PE2 2063 aaPredicted RBP7.69□□□□□ -1.18
DDB1-217ENST00000540166 TGIF2-C20orf24A0A0A6YYL0 155 aa7.69□□□□□ -1.18
DDB1-217ENST00000540166 XKRY2A2RUG3 117 aa7.69□□□□□ -1.18
DDB1-217ENST00000540166 CDRT15L2A8MXV6 281 aa7.69□□□□□ -1.18
DDB1-217ENST00000540166 CLDN34H7C241 214 aa7.69□□□□□ -1.18
DDB1-217ENST00000540166 PPIHO43447 177 aaKnown RBP7.69□□□□□ -1.18
DDB1-217ENST00000540166 FOLR1P15328 257 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms