RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 BAXQ07812 192 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 SPANXN5Q5MJ07 72 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 SLC25A26Q70HW3 274 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 FAM24BQ8N5W8 94 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 TMEM105Q8N8V8 129 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 UBALD1Q8TB05 177 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 RTN4RQ9BZR6 473 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 AKIRIN1Q9H9L7 192 aaPredicted RBP8.86□□□□□ -0.99
TRAF1-202ENST00000540010 ST3GAL6Q9Y274 331 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 A0A1W2PQD3 144 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 ACTL6BO94805 426 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 GLAP06280 429 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 GSTP1P09211 210 aaKnown RBP8.85□□□□□ -0.99
TRAF1-202ENST00000540010 DAOP14920 347 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 ARG2P78540 354 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 TLE1Q04724 770 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 C19orf57Q0VDD7 668 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 MIDNQ504T8 468 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 ISOC2Q96AB3 205 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 ALKBH3Q96Q83 286 aaPredicted RBP8.85□□□□□ -0.99
TRAF1-202ENST00000540010 SF3B6Q9Y3B4 125 aaKnown RBP8.85□□□□□ -0.99
TRAF1-202ENST00000540010 TP53BP1Q12888 1972 aaPredicted RBP8.85□□□□□ -0.99
TRAF1-202ENST00000540010 E5RGE8 158 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 F12P00748 615 aaPredicted RBP8.85□□□□□ -0.99
TRAF1-202ENST00000540010 CPN1P15169 458 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 CXCL2P19875 107 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 PJVKQ0ZLH3 352 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 RAB31Q13636 194 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 MSMO1Q15800 293 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 FNDC7Q5VTL7 733 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 OR5AS1Q8N127 324 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 ARRDC1Q8N5I2 433 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 NANOS1Q8WY41 292 aaKnown RBP8.85□□□□□ -0.99
TRAF1-202ENST00000540010 ST8SIA1Q92185 356 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 KIRREL1Q96J84 757 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 GNG12Q9UBI6 72 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 NSG2Q9Y328 171 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 SPTAN1Q13813 2472 aaKnown RBP8.85□□□□□ -0.99
TRAF1-202ENST00000540010 HLA-DQB1P01920 261 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 AADACP22760 399 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 RFC3P40938 356 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 GABRA2P47869 451 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 RPS4XP62701 263 aaKnown RBP8.85□□□□□ -0.99
TRAF1-202ENST00000540010 MESTQ5EB52 335 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 DCAF12L2Q5VW00 463 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 RPL7L1Q6DKI1 246 aaKnown RBP8.85□□□□□ -0.99
TRAF1-202ENST00000540010 THNSL2Q86YJ6 484 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 DMBX1Q8NFW5 382 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 OR11G2Q8NGC1 345 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 AKR7LQ8NHP1 331 aa8.85□□□□□ -0.99
TRAF1-202ENST00000540010 NXPH2O95156 264 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 NRASP01111 189 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 B4GALT1P15291 398 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 TBPP20226 339 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 SRPXP78539 464 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 SSBP1Q04837 148 aaKnown RBP8.84□□□□□ -0.99
TRAF1-202ENST00000540010 MYBPHQ13203 477 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 SLC23A3Q6PIS1 610 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 PLXDC2Q6UX71 529 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 RBMS3Q6XE24 437 aaKnown RBP8.84□□□□□ -0.99
TRAF1-202ENST00000540010 SLC16A13Q7RTY0 426 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 C6orf201Q7Z4U5 140 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 ZNF561Q8N587 486 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 APCDD1LQ8NCL9 501 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 OR5M8Q8NGP6 311 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 SLC25A43Q8WUT9 341 aaPredicted RBP8.84□□□□□ -0.99
TRAF1-202ENST00000540010 MITD1Q8WV92 249 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 RPUSD4Q96CM3 377 aaKnown RBP8.84□□□□□ -0.99
TRAF1-202ENST00000540010 KLHDC3Q9BQ90 382 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 C12orf49Q9H741 205 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 HSPB2A8KAH6 182 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 GRPP07492 148 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 TCN2P20062 427 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 MLF1P58340 268 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 TGFBR3Q03167 851 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 TRA2AQ13595 282 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRAF1-202ENST00000540010 KISS1Q15726 138 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 HSPB2Q16082 182 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 FBXL14Q8N1E6 418 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 IGLV3-12A0A075B6K2 115 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 C4orf47A7E2U8 309 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 ZNF727A8MUV8 499 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 CXCL13O43927 109 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 GCH1P30793 250 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 GUK1Q16774 197 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 TMEM41BQ5BJD5 291 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 VHLLQ6RSH7 139 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 HSD17B13Q7Z5P4 300 aaPredicted RBP8.84□□□□□ -0.99
TRAF1-202ENST00000540010 VASH2Q86V25 355 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 OR2AE1Q8NHA4 323 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 KISS1RQ969F8 398 aaPredicted RBP8.84□□□□□ -0.99
TRAF1-202ENST00000540010 LURAP1Q96LR2 239 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 SPSB2Q99619 263 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 PRRX2Q99811 253 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 PIGQQ9BRB3 760 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 ARV1Q9H2C2 271 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 PLEKHA2Q9HB19 425 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 MYOTQ9UBF9 498 aa8.84□□□□□ -0.99
TRAF1-202ENST00000540010 PCDHGA9Q9Y5G4 932 aaKnown RBP8.84□□□□□ -0.99
TRAF1-202ENST00000540010 KIF26BQ2KJY2 2108 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms