RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CEACAM6P40199 344 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 CRYBB2P43320 205 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 CNN1P51911 297 aaKnown RBP5.79□□□□□ -1.48
LSAMP-207ENST00000539563 FZD5Q13467 585 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 SPATA46Q5T0L3 261 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 DGAT2L6Q6ZPD8 337 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 OR10D3Q8NH80 312 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 WDR89Q96FK6 387 aaPredicted RBP5.79□□□□□ -1.48
LSAMP-207ENST00000539563 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.79□□□□□ -1.48
LSAMP-207ENST00000539563 TNFSF14O43557 240 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 HNF1AP20823 631 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 ZNF83P51522 516 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 CTF1Q16619 201 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 LINC00303Q3SY05 128 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 MOB3AQ96BX8 217 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 ZNF707Q96C28 371 aaPredicted RBP5.79□□□□□ -1.48
LSAMP-207ENST00000539563 RPUSD4Q96CM3 377 aaKnown RBP5.79□□□□□ -1.48
LSAMP-207ENST00000539563 GAL3ST2Q9H3Q3 398 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 CLCF1Q9UBD9 225 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 NCBP2LA6PVI3 153 aaKnown RBP5.79□□□□□ -1.48
LSAMP-207ENST00000539563 NDUFB6O95139 128 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 TMIGD3P0DMS9 266 aaPredicted RBP5.79□□□□□ -1.48
LSAMP-207ENST00000539563 ZNF17P17021 662 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 AKR1C3P42330 323 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 ZIC1Q15915 447 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 TMEM215Q68D42 235 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 RXFP4Q8TDU9 374 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 ASB10Q8WXI3 467 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 DHRS9Q9BPW9 319 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 WBP1LQ9NX94 342 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 IGHV3-64DA0A0J9YX35 117 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 A0A1W2PQD3 144 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 FAM27D1Q5T7N8 215 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 TMEM147Q9BVK8 224 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 SARGQ9BW04 601 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 WDR61Q9GZS3 305 aaKnown RBP5.79□□□□□ -1.48
LSAMP-207ENST00000539563 ZNF835Q9Y2P0 537 aa5.79□□□□□ -1.48
LSAMP-207ENST00000539563 CTDSPLO15194 276 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 CTSVO60911 334 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 GZMKP49863 264 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 OR52B4Q8NGK2 314 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 C4orf45Q96LM5 186 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 SEBOXQ9HB31 216 aaPredicted RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 M0R1X1 148 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 EPHA2P29317 976 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 DRD3P35462 400 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 ERVFC1-1P60608 527 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 RAC3P60763 192 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 GUCA2AQ02747 115 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 RHBDD2Q6NTF9 364 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 TMEM123Q8N131 208 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 CA5BP1Q8WTZ4 195 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 SERGEFQ9UGK8 458 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 ARL2-SNX15V9GYD0 113 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 GOLGB1Q14789 3259 aaKnown RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 TO15178 435 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 GPANK1O95872 356 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 OR2B8PP59922 312 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 LSM6P62312 80 aaKnown RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 ATP6V1FQ16864 119 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 STUMQ69YW2 141 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 KLHDC1Q8N7A1 406 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 THYN1Q9P016 225 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 MTFP1Q9UDX5 166 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 A0A1B0GTL3 188 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 C9orf170A2RU37 121 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 C21orf140B9A014 251 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 ZNF32P17041 273 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 TGFBR1P36897 503 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 KLF3P57682 345 aaPredicted RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 NXPH1P58417 271 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 PRDX4Q13162 271 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 EXOSC2Q13868 293 aaKnown RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 IL13RA2Q14627 380 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 FFAR4Q5NUL3 377 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 TEX261Q6UWH6 196 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 BTLAQ7Z6A9 289 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 OR10V1Q8NGI7 309 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 SLIRPQ9GZT3 109 aaKnown RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 SIRT3Q9NTG7 399 aaPredicted RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 U3KQ87 197 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 SHANK3Q9BYB0 1731 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 hADV38S2A0JD32 116 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 ZNF320A2RRD8 509 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 C5orf67F2Z3F1 127 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 TRIM77I1YAP6 450 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 CEACAM3P40198 252 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 PCBP3P57721 371 aaKnown RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 RANP62826 216 aaKnown RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 TNFAIP6P98066 277 aaPredicted RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 OR1L4Q8NGR5 311 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 ARHGAP5-AS1Q96IT6 56 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 ADTRPQ96IZ2 230 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 CRISPLD2Q9H0B8 497 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 ZNF275Q9NSD4 429 aaPredicted RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 PLEKHB1Q9UF11 243 aaPredicted RBP5.78□□□□□ -1.48
LSAMP-207ENST00000539563 LTBP4Q8N2S1 1624 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 TRPM7Q96QT4 1865 aa5.78□□□□□ -1.48
LSAMP-207ENST00000539563 SHISA8B8ZZ34 492 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms