RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 GALNTL5Q7Z4T8 443 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 C6orf201Q7Z4U5 140 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 ZNF561Q8N587 486 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 SLC38A9Q8NBW4 561 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 SMRP1Q8NCR6 262 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 OR10G3Q8NGC4 313 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 Q96M66 194 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 PIGQQ9BRB3 760 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 CRB3Q9BUF7 120 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 SLC7A5P2Q9GIP4 190 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 PCED1AQ9H1Q7 454 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 PLEKHJ1Q9NW61 149 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 MYOTQ9UBF9 498 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 ANXA10Q9UJ72 324 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 KCNIP3Q9Y2W7 256 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 NSG2Q9Y328 171 aa8.46□□□□□ -1.06
CDH13-204ENST00000539548 LSM5Q9Y4Y9 91 aaKnown RBP8.46□□□□□ -1.06
CDH13-204ENST00000539548 ZFAND5O76080 213 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 S100A8P05109 93 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 DANCRP0C864 163 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 FAHP16930 419 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 AGAP20933 346 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 PMELP40967 661 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 EIF1P41567 113 aaKnown RBP8.45□□□□□ -1.06
CDH13-204ENST00000539548 GUCA1AP43080 201 aaPredicted RBP8.45□□□□□ -1.06
CDH13-204ENST00000539548 SUCLG1P53597 346 aaKnown RBP8.45□□□□□ -1.06
CDH13-204ENST00000539548 CLDN17P56750 224 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 ENDOGQ14249 297 aaKnown RBP8.45□□□□□ -1.06
CDH13-204ENST00000539548 TSC22D1Q15714 1073 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 TMEM176BQ3YBM2 270 aaPredicted RBP8.45□□□□□ -1.06
CDH13-204ENST00000539548 NKAIN1Q4KMZ8 207 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 C10orf128Q5T292 105 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 GPR157Q5UAW9 335 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 RPUSD3Q6P087 351 aaKnown RBP8.45□□□□□ -1.06
CDH13-204ENST00000539548 FOXL2NBQ6ZUU3 175 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 DTX1Q86Y01 620 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 SLC39A7Q92504 469 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 GINS3Q9BRX5 216 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 SMIM3Q9BZL3 60 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 RPS10P5Q9NQ39 176 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 PIGLQ9Y2B2 252 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 BORCS7-ASMTA0A0B4J1R7 106 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 C7orf77A4D0Y5 90 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 OR5H15A6NDH6 313 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 F5H5K5 113 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 UBE2CO00762 179 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 MBPP02686 304 aaPredicted RBP8.45□□□□□ -1.06
CDH13-204ENST00000539548 OR5H8P0DN80 308 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 ZNF44P15621 663 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 KLK2P20151 261 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 OTX1P32242 354 aaPredicted RBP8.45□□□□□ -1.06
CDH13-204ENST00000539548 SFTPDP35247 375 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 PPT1P50897 306 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 TMEM187Q14656 261 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 ETV3LQ6ZN32 361 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 CPEB2Q7Z5Q1 589 aaKnown RBP8.45□□□□□ -1.06
CDH13-204ENST00000539548 LRTM2Q8N967 370 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 FADS6Q8N9I5 356 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 TMEM54Q969K7 222 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 ERGIC1Q969X5 290 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 GALNT14Q96FL9 552 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 TAAR9Q96RI9 348 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 NELFAQ9H3P2 528 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 ELL3Q9HB65 397 aaPredicted RBP8.45□□□□□ -1.06
CDH13-204ENST00000539548 HSF4Q9ULV5 492 aa8.45□□□□□ -1.06
CDH13-204ENST00000539548 H7C1Q1 480 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 MASP2O00187 686 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 MSTNO14793 375 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 GPR137BO60478 399 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 OR2J2O76002 312 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 DKK1O94907 266 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 SMIM6P0DI80 62 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 ZNF728P0DKX0 622 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 GABRR1P24046 479 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 LMO1P25800 156 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 CSNK1A1P48729 337 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 GUK1Q16774 197 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 EIF2S3LQ2VIR3 472 aaKnown RBP8.44□□□□□ -1.06
CDH13-204ENST00000539548 MIDNQ504T8 468 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 LCN10Q6JVE6 187 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 SLC25A45Q8N413 288 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 WDSUB1Q8N9V3 476 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 SLC22A8Q8TCC7 542 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 PIGTQ969N2 578 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 BSCL2Q96G97 398 aaPredicted RBP8.44□□□□□ -1.06
CDH13-204ENST00000539548 HDHD3Q9BSH5 251 aaPredicted RBP8.44□□□□□ -1.06
CDH13-204ENST00000539548 LIME1Q9H400 295 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 RGCCQ9H4X1 137 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 NAA60Q9H7X0 242 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 LMAN1LQ9HAT1 526 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 NECAP2Q9NVZ3 263 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 LUZP4Q9P127 313 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 CEP192Q8TEP8 1941 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 TOX3O15405 576 aaPredicted RBP8.44□□□□□ -1.06
CDH13-204ENST00000539548 TMEM225BP0DP42 221 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 MYF5P13349 255 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 DTYMKP23919 212 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 P2RY1P47900 373 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 RAB5CP51148 216 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 PIGPP57054 158 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms