RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ZNF708P17019 499 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 NME2P22392 152 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 H3F3CQ6NXT2 135 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 YRDCQ86U90 279 aaKnown RBP10.43□□□□□ -0.74
CPNE8-203ENST00000538596 TMEM156Q8N614 296 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 RHBDD1Q8TEB9 315 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 TOMM40LQ969M1 308 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 PARP12Q9H0J9 701 aaKnown RBP10.43□□□□□ -0.74
CPNE8-203ENST00000538596 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.43□□□□□ -0.74
CPNE8-203ENST00000538596 PLA2G2EQ9NZK7 142 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 LPAR3Q9UBY5 353 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 NCKAP5O14513 1909 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 HKR1P10072 659 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 LPAR6P43657 344 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 NPBWR1P48145 328 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 HIST1H3AP68431 136 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 SCRN3Q0VDG4 424 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 FAM189A2Q15884 450 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 HIST2H3PS2Q5TEC6 136 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 TSPO2Q5TGU0 170 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 HIST2H3AQ71DI3 136 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 SVBPQ8N300 66 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 AKR7LQ8NHP1 331 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 MRPL24Q96A35 216 aaKnown RBP10.43□□□□□ -0.74
CPNE8-203ENST00000538596 Q96M66 194 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 ALKBH3Q96Q83 286 aaPredicted RBP10.43□□□□□ -0.74
CPNE8-203ENST00000538596 ANGPTL4Q9BY76 406 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 CRLF2Q9HC73 371 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 GHRLQ9UBU3 117 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 AK3Q9UIJ7 227 aa10.43□□□□□ -0.74
CPNE8-203ENST00000538596 LOC102723996A0A087X1L8 192 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 FARS2O95363 451 aaKnown RBP10.42□□□□□ -0.74
CPNE8-203ENST00000538596 SCGB1D2O95969 90 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 B4GALT1P15291 398 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 RBMXP38159 391 aaKnown RBP10.42□□□□□ -0.74
CPNE8-203ENST00000538596 DSCR4P56555 118 aaPredicted RBP10.42□□□□□ -0.74
CPNE8-203ENST00000538596 OPN5Q6U736 354 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 SULF2Q8IWU5 870 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 MAML2Q8IZL2 1156 aaPredicted RBP10.42□□□□□ -0.74
CPNE8-203ENST00000538596 ADAMTS17Q8TE56 1095 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 CLDN23Q96B33 292 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 CNTNAP3BQ96NU0 1288 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 SAV1Q9H4B6 383 aaPredicted RBP10.42□□□□□ -0.74
CPNE8-203ENST00000538596 HPF1Q9NWY4 346 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 KIAA1549Q9HCM3 1950 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 CCDC187A0A096LP49 1063 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 CFIP05156 583 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 MUC1P15941 1255 aaPredicted RBP10.42□□□□□ -0.74
CPNE8-203ENST00000538596 NFYBP25208 207 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 SSR4P51571 173 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 STK11Q15831 433 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 PIGYQ3MUY2 71 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 HAGHLQ6PII5 290 aaPredicted RBP10.42□□□□□ -0.74
CPNE8-203ENST00000538596 FOXL2NBQ6ZUU3 175 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 MARS2Q96GW9 593 aaKnown RBP10.42□□□□□ -0.74
CPNE8-203ENST00000538596 REEP6Q96HR9 211 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 TAF9BQ9HBM6 251 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 MMP26Q9NRE1 261 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 UQCC1Q9NVA1 299 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 LSM5Q9Y4Y9 91 aaKnown RBP10.42□□□□□ -0.74
CPNE8-203ENST00000538596 ZDBF2Q9HCK1 2354 aa10.42□□□□□ -0.74
CPNE8-203ENST00000538596 A0A087WZY1 265 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 PATE3B3GLJ2 98 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 SGCEO43556 437 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 EIF1BO60739 113 aaKnown RBP10.41□□□□□ -0.74
CPNE8-203ENST00000538596 MTRF1O75570 445 aaKnown RBP10.41□□□□□ -0.74
CPNE8-203ENST00000538596 MED6O75586 246 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 F10P00742 488 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 OR5H8P0DN80 308 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 FGF5P12034 268 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 FXYD4P59646 89 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 RSU1Q15404 277 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 SPTSSAQ969W0 71 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 BSCL2Q96G97 398 aaPredicted RBP10.41□□□□□ -0.74
CPNE8-203ENST00000538596 SULT4A1Q9BR01 284 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 RHOFQ9HBH0 211 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 ANXA10Q9UJ72 324 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 SIT1Q9Y3P8 196 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 LCATP04180 440 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 NR2C1P13056 603 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 FKBP2P26885 142 aaKnown RBP10.41□□□□□ -0.74
CPNE8-203ENST00000538596 ZNF84P51523 738 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 RPS18P62269 152 aaKnown RBP10.41□□□□□ -0.74
CPNE8-203ENST00000538596 PJVKQ0ZLH3 352 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 CCDC157Q569K6 752 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 FAM27BQ5VT28 67 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 GGNBP1Q5YKI7 109 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 RPS19BP1Q86WX3 136 aaKnown RBP10.41□□□□□ -0.74
CPNE8-203ENST00000538596 FGFBP3Q8TAT2 258 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 NAA11Q9BSU3 229 aaPredicted RBP10.41□□□□□ -0.74
CPNE8-203ENST00000538596 CNTNAP3Q9BZ76 1288 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 WDR54Q9H977 334 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 C1orf123Q9NWV4 160 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 NXT1Q9UKK6 140 aaKnown RBP10.41□□□□□ -0.74
CPNE8-203ENST00000538596 PADI1Q9ULC6 663 aa10.41□□□□□ -0.74
CPNE8-203ENST00000538596 IGKV1-12A0A0C4DH73 117 aa10.4□□□□□ -0.74
CPNE8-203ENST00000538596 ZNF850A8MQ14 1090 aa10.4□□□□□ -0.74
CPNE8-203ENST00000538596 C9JQL5 133 aa10.4□□□□□ -0.74
CPNE8-203ENST00000538596 GEMIN2O14893 280 aaKnown RBP10.4□□□□□ -0.74
CPNE8-203ENST00000538596 SYNGR3O43761 229 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms