RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-210	ENST00000538318	CFHR4	Q92496	578 aa		13.58	□□□□□ -0.24
PTPN6-210	ENST00000538318	PPP1R14A	Q96A00	147 aa		13.58	□□□□□ -0.24
PTPN6-210	ENST00000538318	OR8B4	Q96RC9	309 aa		13.58	□□□□□ -0.24
PTPN6-210	ENST00000538318	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN6-210	ENST00000538318	HEXA-AS1	Q9H8Q6	139 aa		13.58	□□□□□ -0.24
PTPN6-210	ENST00000538318	TMEM14A	Q9Y6G1	99 aa		13.58	□□□□□ -0.24
PTPN6-210	ENST00000538318	MEGF11	A6BM72	1044 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	SLC1A7	O00341	560 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	NOS1AP	O75052	506 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	DHRS3	O75911	302 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	NRAS	P01111	189 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	MRPL3	P09001	348 aa	Known RBP	13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	PGA5	P0DJD9	388 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	PRDX2	P32119	198 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	HAAO	P46952	286 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	SNAPC1	Q16533	368 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	ZNF684	Q5T5D7	378 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	TMEM42	Q69YG0	159 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	ZNF573	Q86YE8	665 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	PIFO	Q8TCI5	191 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	ZNF488	Q96MN9	340 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	THTPA	Q9BU02	230 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	TVP23B	Q9NYZ1	205 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	COPS3	Q9UNS2	423 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	FOXJ3	Q9UPW0	622 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318	PLXNB1	O43157	2135 aa		13.57	□□□□□ -0.24
PTPN6-210	ENST00000538318		J3QT63	122 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	SYNGR1	O43759	233 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	SRSF10	O75494	262 aa	Known RBP	13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	TTR	P02766	147 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	OPN1MW	P04001	364 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	OPN1MW2	P0DN77	364 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	OPN1MW3	P0DN78	364 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	PAX6	P26367	422 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	RIDA	P52758	137 aa	Known RBP	13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	CRISP1	P54107	249 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	MFGE8	Q08431	387 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	LCN1P1	Q5VSP4	162 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	LIAT1	Q6ZQX7	453 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	OR2T6	Q8NHC8	308 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	NRIP2	Q9BQI9	281 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	USE1	Q9NZ43	259 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	DNAJB9	Q9UBS3	223 aa		13.56	□□□□□ -0.24
PTPN6-210	ENST00000538318	hCG_1809904	A0A1W2PP81	198 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318		A0A1W2PPE2	198 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318		A0A1W2PR64	198 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318		A0A1W2PRV1	198 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	PQLC2L	A1A4F0	135 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	DLGAP1	O14490	977 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	CHST1	O43916	411 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	CEBPD	P49716	269 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	ERVFRD-1	P60508	538 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	BEAN1	Q3B7T3	259 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	CLVS2	Q5SYC1	327 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	CALHM1	Q8IU99	346 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	KLHDC1	Q8N7A1	406 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	DTX3	Q8N9I9	347 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	CCDC197	Q8NCU1	140 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	OR4M1	Q8NGD0	313 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	OR2T27	Q8NH04	317 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	DNAJC9	Q8WXX5	260 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	TTTY10	Q9BZA0	68 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	NPFFR1	Q9GZQ6	430 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	HES4	Q9HCC6	221 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	IKZF2	Q9UKS7	526 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	POLDIP2	Q9Y2S7	368 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318		V9GYS6	101 aa		13.55	□□□□□ -0.24
PTPN6-210	ENST00000538318	FAM90A8P	A6NJQ4	464 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	VGLL3	A8MV65	326 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318		G3V4G9	280 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	NXPH2	O95156	264 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	FAM107A	O95990	144 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	CCL3L1	P16619	93 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	MPZ	P25189	248 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	BMX	P51813	675 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	LGALS4	P56470	323 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	CBX1	P83916	185 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	ZNF273	Q14593	569 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	KPRP	Q5T749	579 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	HIST2H2BD	Q6DRA6	164 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318		Q6ZSR3	168 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	ELMOD2	Q8IZ81	293 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	C11orf44	Q8N8P7	122 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	NRBF2	Q96F24	287 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	CNN2	Q99439	309 aa	Known RBP	13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	MOB1A	Q9H8S9	216 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	GPR173	Q9NS66	373 aa		13.54	□□□□□ -0.24
PTPN6-210	ENST00000538318	DSCAML1	Q8TD84	2053 aa		13.53	□□□□□ -0.24
PTPN6-210	ENST00000538318		A0A1B0GTI1	187 aa		13.53	□□□□□ -0.24
PTPN6-210	ENST00000538318	DHRS7C	A6NNS2	312 aa		13.53	□□□□□ -0.24
PTPN6-210	ENST00000538318	C17orf98	A8MV24	154 aa		13.53	□□□□□ -0.24
PTPN6-210	ENST00000538318	LOC110117498-PIK3R3	F6TDL0	507 aa		13.53	□□□□□ -0.24
PTPN6-210	ENST00000538318	PRKY	O43930	277 aa		13.53	□□□□□ -0.24
PTPN6-210	ENST00000538318	FKBP6	O75344	327 aa		13.53	□□□□□ -0.24
PTPN6-210	ENST00000538318	TK1	P04183	234 aa		13.53	□□□□□ -0.24
PTPN6-210	ENST00000538318	COX7A1	P24310	79 aa		13.53	□□□□□ -0.24
PTPN6-210	ENST00000538318	DLX6	P56179	175 aa		13.53	□□□□□ -0.24
PTPN6-210	ENST00000538318	CXCR4	P61073	352 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms