RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ZNF429Q86V71 674 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 TMEM185AQ8NFB2 350 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 GJC3Q8NFK1 279 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 PITX2Q99697 317 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 SLC25A33Q9BSK2 321 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 GABARAPL3Q9BY60 117 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 VCX3AQ9NNX9 186 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 PAPOLBQ9NRJ5 636 aaKnown RBP7.25□□□□□ -1.25
USP28-205ENST00000537706 KRT84Q9NSB2 600 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 PLA2G2EQ9NZK7 142 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 RSL24D1Q9UHA3 163 aaKnown RBP7.25□□□□□ -1.25
USP28-205ENST00000537706 SLC7A7Q9UM01 511 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 M0QX08 132 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 SLC1A7O00341 560 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 MITFO75030 526 aaPredicted RBP7.25□□□□□ -1.25
USP28-205ENST00000537706 SELLP14151 372 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 GP9P14770 177 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 RRM2P31350 389 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 GABRA2P47869 451 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 MTNR1BP49286 362 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 ISL1P61371 349 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 DYNC1I2Q13409 638 aaKnown RBP7.25□□□□□ -1.25
USP28-205ENST00000537706 LAPTM4AQ15012 233 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 ENTPD8Q5MY95 495 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 C6orf141Q5SZD1 244 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 MINOS1Q5TGZ0 78 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 LCNL1Q6ZST4 164 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 ZNF329Q86UD4 541 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 OR5T2Q8NGG2 359 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 OR4C15Q8NGM1 316 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 MOSPD2Q8NHP6 518 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 NDNFQ8TB73 568 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 ST6GALNAC6Q969X2 333 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 GAFA1Q96PS6 74 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 RIBC2Q9H4K1 309 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 MINOS1-NBL1R4GNA1 71 aa7.25□□□□□ -1.25
USP28-205ENST00000537706 ARRDC5A6NEK1 342 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 ANKRD30BLA7E2S9 258 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 SCG5P05408 212 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 ACAA1P09110 424 aaPredicted RBP7.24□□□□□ -1.25
USP28-205ENST00000537706 JUNBP17275 347 aaPredicted RBP7.24□□□□□ -1.25
USP28-205ENST00000537706 CD247P20963 164 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 GNALP38405 381 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 YAP1P46937 504 aaKnown RBP7.24□□□□□ -1.25
USP28-205ENST00000537706 POU3F4P49335 361 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 ENTPD1P49961 510 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 LSAMPQ13449 338 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 KIR2DS1Q14954 304 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 DGUOKQ16854 277 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 ZNF770Q6IQ21 691 aaPredicted RBP7.24□□□□□ -1.25
USP28-205ENST00000537706 RASSF5Q8WWW0 418 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 APOL4Q9BPW4 351 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 SNTG1Q9NSN8 517 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 ENPP4Q9Y6X5 453 aa7.24□□□□□ -1.25
USP28-205ENST00000537706 FAM90A22PA8MWA6 464 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 TNFRSF11BO00300 401 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 XKRYO14609 159 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 RER1O15258 196 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 OR2F2O95006 317 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 SNRNP70P08621 437 aaKnown RBP7.23□□□□□ -1.25
USP28-205ENST00000537706 ANXA8P13928 327 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 RHCEP18577 417 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 SDHAP31040 664 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 CXCR4P61073 352 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 LAIR2Q6ISS4 152 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 KCTD8Q6ZWB6 473 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 OR10G2Q8NGC3 310 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 OR6Q1Q8NGQ2 317 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 GIPC3Q8TF64 312 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 NDEL1Q9GZM8 345 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 HILPDAQ9Y5L2 63 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 GMPPBQ9Y5P6 360 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 F5H5K5 113 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 TPST2O60704 377 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 KHDRBS3O75525 346 aaKnown RBP7.23□□□□□ -1.25
USP28-205ENST00000537706 TNFRSF1BP20333 461 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 DCKP27707 260 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 POLR2IP36954 125 aaKnown RBP7.23□□□□□ -1.25
USP28-205ENST00000537706 OR1E2P47887 323 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 TPTEP56180 551 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 GMFBP60983 142 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 RPL31P62899 125 aaKnown RBP7.23□□□□□ -1.25
USP28-205ENST00000537706 SRSF7Q16629 238 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP28-205ENST00000537706 MICAQ29983 383 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 CXorf66Q5JRM2 361 aaPredicted RBP7.23□□□□□ -1.25
USP28-205ENST00000537706 WDR82Q6UXN9 313 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 ZNF782Q6ZMW2 699 aaPredicted RBP7.23□□□□□ -1.25
USP28-205ENST00000537706 TSPYL5Q86VY4 417 aaPredicted RBP7.23□□□□□ -1.25
USP28-205ENST00000537706 LYPD6Q86Y78 171 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 CALHM1Q8IU99 346 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 OR1M1Q8NGA1 313 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 OR10Z1Q8NGY1 313 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 OPA3Q9H6K4 179 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 ELL3Q9HB65 397 aaPredicted RBP7.23□□□□□ -1.25
USP28-205ENST00000537706 CHCHD3Q9NX63 227 aaKnown RBP7.23□□□□□ -1.25
USP28-205ENST00000537706 ENOPH1Q9UHY7 261 aa7.23□□□□□ -1.25
USP28-205ENST00000537706 FAM32AQ9Y421 112 aaKnown RBP7.23□□□□□ -1.25
USP28-205ENST00000537706 TEX13CA0A0J9YWL9 993 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 ODF3BA8MYP8 253 aa7.22□□□□□ -1.25
USP28-205ENST00000537706 MRPS14O60783 128 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms