RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 ESM1Q9NQ30 184 aa5.83□□□□□ -1.48
YBX3-206ENST00000536823 ING3Q9NXR8 418 aa5.83□□□□□ -1.48
YBX3-206ENST00000536823 ERVK-18Q9QC07 812 aa5.83□□□□□ -1.48
YBX3-206ENST00000536823 ZNF69Q9UC07 566 aa5.83□□□□□ -1.48
YBX3-206ENST00000536823 NUFIP1Q9UHK0 495 aaKnown RBP5.83□□□□□ -1.48
YBX3-206ENST00000536823 IKZF2Q9UKS7 526 aa5.83□□□□□ -1.48
YBX3-206ENST00000536823 NUP50Q9UKX7 468 aa5.83□□□□□ -1.48
YBX3-206ENST00000536823 OAZ3Q9UMX2 235 aa5.83□□□□□ -1.48
YBX3-206ENST00000536823 TRAV40A0A0B4J280 105 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 ZNF816-ZNF321PA0A0X1KG74 233 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 TMEM269A0A1B0GVZ9 245 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 SAC3D1A6NKF1 404 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 ZNF850A8MQ14 1090 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 SRRM5B3KS81 715 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 ZNF670-ZNF695F2Z2N8 137 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.82□□□□□ -1.48
YBX3-206ENST00000536823 TRIM77I1YAP6 450 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 PSMD9O00233 223 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 SLC16A6O15403 523 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 IGLV3-1P01715 115 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 GYPAP02724 150 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 IGHV4-38-2P0DP08 117 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 GYPEP15421 78 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 MUC1P15941 1255 aaPredicted RBP5.82□□□□□ -1.48
YBX3-206ENST00000536823 CXCR4P61073 352 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 FGF12P61328 243 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 ACTG1P63261 375 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 MFGE8Q08431 387 aaPredicted RBP5.82□□□□□ -1.48
YBX3-206ENST00000536823 KPNB1Q14974 876 aaKnown RBP5.82□□□□□ -1.48
YBX3-206ENST00000536823 ZFP1Q6P2D0 407 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 ZNF322Q6U7Q0 402 aaPredicted RBP5.82□□□□□ -1.48
YBX3-206ENST00000536823 CCDC121Q6ZUS5 278 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 C9orf139Q6ZV77 190 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 KRT74Q7RTS7 529 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 COMMD2Q86X83 199 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 C11orf53Q8IXP5 236 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 SLC35F2Q8IXU6 374 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 ZDHHC23Q8IYP9 409 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 SIGLECL1Q8N7X8 197 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 ZDHHC22Q8N966 263 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 OR10Z1Q8NGY1 313 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 OR51E1Q8TCB6 317 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 FAM216AQ8WUB2 273 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 PYDC1Q8WXC3 89 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 OR5P3Q8WZ94 311 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 IL4I1Q96RQ9 567 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 RBM4BQ9BQ04 359 aaKnown RBP5.82□□□□□ -1.48
YBX3-206ENST00000536823 OSBPL10Q9BXB5 764 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 MROQ9BYG7 248 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 PBOV1Q9GZY1 135 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 SEMA6AQ9H2E6 1030 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 RIBC2Q9H4K1 309 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 MOB1AQ9H8S9 216 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 CLN6Q9NWW5 311 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 HAO2Q9NYQ3 351 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 KAAG1Q9UBP8 84 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 WARS2Q9UGM6 360 aaKnown RBP5.82□□□□□ -1.48
YBX3-206ENST00000536823 PKD1L1Q8TDX9 2849 aa5.82□□□□□ -1.48
YBX3-206ENST00000536823 WNK1Q9H4A3 2382 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 TRRAPQ9Y4A5 3859 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 IGHV3OR15-7A0A075B7D8 119 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 DNAJC9-AS1A6NH13 148 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 LOC110117498-PIK3R3F6TDL0 507 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 H3BNX3 289 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 CDIPTO14735 213 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 SRSF10O75494 262 aaKnown RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 FCN3O75636 299 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 TTRP02766 147 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 MMP9P14780 707 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 HTR1FP30939 366 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 POLR2IP36954 125 aaKnown RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 GPM6AP51674 278 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 ACTR3P61158 418 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 UBA52P62987 128 aaKnown RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 GNG3P63215 75 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 MICBQ29980 383 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 FAM76BQ5HYJ3 339 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 WDR38Q5JTN6 314 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 BCL2L15Q5TBC7 163 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 STUMQ69YW2 141 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 RBMS3Q6XE24 437 aaKnown RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 KCTD8Q6ZWB6 473 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 OR51G2Q8NGK0 314 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 OR8J1Q8NGP2 316 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 OR14K1Q8NGZ2 314 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 PIGCQ92535 297 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 RPL3LQ92901 407 aaKnown RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 C12orf43Q96C57 262 aaKnown RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 RNF170Q96K19 258 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 FAM71F1Q96KD3 344 aaPredicted RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 ZNF48Q96MX3 618 aaPredicted RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 RAB3IPQ96QF0 476 aaPredicted RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 GPHA2Q96T91 129 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 APOL4Q9BPW4 351 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 MS4A7Q9GZW8 240 aaPredicted RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 ZMAT3Q9HA38 289 aaKnown RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 GPR84Q9NQS5 396 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 USE1Q9NZ43 259 aa5.81□□□□□ -1.48
YBX3-206ENST00000536823 MRM2Q9UI43 246 aaKnown RBP5.81□□□□□ -1.48
YBX3-206ENST00000536823 DMRT1Q9Y5R6 373 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms