RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 ANGPTL7O43827 346 aa11.48□□□□□ -0.57
LDLR-203ENST00000535915 CSTBP04080 98 aaKnown RBP11.48□□□□□ -0.57
LDLR-203ENST00000535915 LCATP04180 440 aa11.48□□□□□ -0.57
LDLR-203ENST00000535915 TDGF1P13385 188 aa11.48□□□□□ -0.57
LDLR-203ENST00000535915 CRYGSP22914 178 aa11.48□□□□□ -0.57
LDLR-203ENST00000535915 NTF4P34130 210 aa11.48□□□□□ -0.57
LDLR-203ENST00000535915 SIGLEC14Q08ET2 396 aa11.48□□□□□ -0.57
LDLR-203ENST00000535915 RTL6Q6ICC9 239 aa11.48□□□□□ -0.57
LDLR-203ENST00000535915 BHLHE23Q8NDY6 225 aa11.48□□□□□ -0.57
LDLR-203ENST00000535915 EMG1Q92979 244 aaKnown RBP11.48□□□□□ -0.57
LDLR-203ENST00000535915 NARS2Q96I59 477 aaKnown RBP11.48□□□□□ -0.57
LDLR-203ENST00000535915 OR10C1Q96KK4 312 aa11.48□□□□□ -0.57
LDLR-203ENST00000535915 HDHD3Q9BSH5 251 aaPredicted RBP11.48□□□□□ -0.57
LDLR-203ENST00000535915 C14orf166Q9Y224 244 aaKnown RBP11.48□□□□□ -0.57
LDLR-203ENST00000535915 NOSIPQ9Y314 301 aaKnown RBP11.48□□□□□ -0.57
LDLR-203ENST00000535915 IGKV1D-8A0A087WSZ0 117 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 FAM74A7A6NL05 159 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 SYNGR3O43761 229 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 TRAPPC6AO75865 159 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 HOXB5P09067 269 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 PATE4P0C8F1 98 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 B4GALT1P15291 398 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 RSU1Q15404 277 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 FAM74A3Q4VXF1 159 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 CCDC36Q8IYA8 594 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 OR1F12Q8NHA8 337 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 RHBDD1Q8TEB9 315 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 KCNE4Q8WWG9 221 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 Q96M66 194 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 PRDM6Q9NQX0 595 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 ASF1BQ9NVP2 202 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 TMEM38BQ9NVV0 291 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 OR5AC2Q9NZP5 309 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 GSKIPQ9P0R6 139 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 F8VVB4 439 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 F8VWA3 439 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 CXCL13O43927 109 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 CST2P09228 141 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 RFPL3SP0C7P2 107 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 ZNF32P17041 273 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 HGFACQ04756 655 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 PPA1Q15181 289 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 PDSS1Q5T2R2 415 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 PRSS54Q6PEW0 395 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 AAED1Q7RTV5 226 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 GGNQ86UU5 652 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 FAM219AQ8IW50 185 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 BPIFCQ8NFQ6 507 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 OR1S2Q8NGQ3 325 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 AKR7LQ8NHP1 331 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 STOML3Q8TAV4 291 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 SPSB1Q96BD6 273 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 LRRC46Q96FV0 321 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 METTL9Q9H1A3 318 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 PCDHB10Q9UN67 800 aa11.47□□□□□ -0.57
LDLR-203ENST00000535915 FIGNL2A6NMB9 653 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 DHRS7CA6NNS2 312 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 CA11O75493 328 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 IGHEP01854 428 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 RPS2P15880 293 aaKnown RBP11.46□□□□□ -0.57
LDLR-203ENST00000535915 HTR5AP47898 357 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 Q0VFX4 171 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 AIMP2Q13155 320 aaKnown RBP11.46□□□□□ -0.57
LDLR-203ENST00000535915 SURF2Q15527 256 aaPredicted RBP11.46□□□□□ -0.57
LDLR-203ENST00000535915 PEAR1Q5VY43 1037 aaPredicted RBP11.46□□□□□ -0.57
LDLR-203ENST00000535915 PLXDC2Q6UX71 529 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 ZNF600Q6ZNG1 722 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 PPP1R32Q7Z5V6 425 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 SULF2Q8IWU5 870 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 BAP18Q8IXM2 172 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 C2orf50Q96LR7 162 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 ZNF2Q9BSG1 426 aaPredicted RBP11.46□□□□□ -0.57
LDLR-203ENST00000535915 FAM117AQ9C073 453 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 PIGMQ9H3S5 423 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 ACKR4Q9NPB9 350 aa11.46□□□□□ -0.57
LDLR-203ENST00000535915 MSGN1A6NI15 193 aa11.46□□□□□ -0.58
LDLR-203ENST00000535915 ZNF716A6NP11 495 aa11.46□□□□□ -0.58
LDLR-203ENST00000535915 HAAOP46952 286 aa11.46□□□□□ -0.58
LDLR-203ENST00000535915 RGS19P49795 217 aa11.46□□□□□ -0.58
LDLR-203ENST00000535915 RAB32Q13637 225 aa11.46□□□□□ -0.58
LDLR-203ENST00000535915 CNN3Q15417 329 aaKnown RBP11.46□□□□□ -0.58
LDLR-203ENST00000535915 TAF9Q16594 264 aa11.46□□□□□ -0.58
LDLR-203ENST00000535915 PLEKHN1Q494U1 663 aaPredicted RBP11.46□□□□□ -0.58
LDLR-203ENST00000535915 WIPI1Q5MNZ9 446 aaPredicted RBP11.46□□□□□ -0.58
LDLR-203ENST00000535915 RPUSD3Q6P087 351 aaKnown RBP11.46□□□□□ -0.58
LDLR-203ENST00000535915 NAXEQ8NCW5 288 aa11.46□□□□□ -0.58
LDLR-203ENST00000535915 CPT1CQ8TCG5 803 aa11.46□□□□□ -0.58
LDLR-203ENST00000535915 FAAP24Q9BTP7 215 aa11.46□□□□□ -0.58
LDLR-203ENST00000535915 PADI1Q9ULC6 663 aa11.46□□□□□ -0.58
LDLR-203ENST00000535915 SFTPBP07988 381 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 TCN2P20062 427 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 PTGER4P35408 488 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 MEOX2P50222 304 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 ARHGDIBP52566 201 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 S100A10P60903 97 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 DCAF12Q5T6F0 453 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.45□□□□□ -0.58
LDLR-203ENST00000535915 OR51F2Q8NH61 342 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 OR10D3Q8NH80 312 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 BORCS8Q96FH0 119 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms