RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 RFPL4AA6NLU0 287 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 RFPL4AL1F8VTS6 287 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 J3QT63 122 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 DLGAP1O14490 977 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 RHBDL1O75783 438 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 GATBO75879 557 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 SELLP14151 372 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 FAHP16930 419 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 PRDX2P32119 198 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 ARHGDIBP52566 201 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 CRISP1P54107 249 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 SLC35E4Q6ICL7 350 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 ZNF322Q6U7Q0 402 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 ASRGL1Q7L266 308 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 GDPD3Q7L5L3 318 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 GID4Q8IVV7 300 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 ADGRG5Q8IZF4 528 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 FGFRL1Q8N441 504 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 ASCC1Q8N9N2 400 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 POC1AQ8NBT0 407 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 OR5K1Q8NHB7 308 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 AQP3Q92482 292 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 SDSLQ96GA7 329 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 OR8B4Q96RC9 309 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 TEAD3Q99594 435 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 NKX3-1Q99801 234 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 SLC25A19Q9HC21 320 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 TAS2R1Q9NYW7 299 aa10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 NUFIP1Q9UHK0 495 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-205ENST00000535452 FKBP6O75344 327 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 DNAJC8O75937 253 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 ANOS1P23352 680 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 COX7A1P24310 79 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 OR12D2P58182 307 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 CXCR4P61073 352 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 ELF3P78545 371 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 ROM1Q03395 351 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 PRB3Q04118 309 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 SLX4IPQ5VYV7 408 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 ACP7Q6ZNF0 438 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 FAM220AQ7Z4H9 259 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 CALHM1Q8IU99 346 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 Q8N7P7 452 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 CCDC54Q8NEL0 328 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 OR4S1Q8NGB4 309 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 PPP1R35Q8TAP8 253 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 LYZL4Q96KX0 146 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 PPP1R3EQ9H7J1 279 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 ELL3Q9HB65 397 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 NEK6Q9HC98 313 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 FAM206AQ9NX38 181 aa10.83□□□□□ -0.68
CLSTN3-205ENST00000535452 DHRS7CA6NNS2 312 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 VSIG10L2P0DP72 767 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 PRKACGP22612 351 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 KIR2DS4P43632 304 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 RASSF2P50749 326 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 EDDM3BP56851 147 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 DYNC1I2Q13409 638 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 TMEM236Q5W0B7 351 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 ZBTB49Q6ZSB9 765 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 MEPCEQ7L2J0 689 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 SLC35F2Q8IXU6 374 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 PNKDQ8N490 385 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 YIPF7Q8N8F6 280 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 BBS1Q8NFJ9 593 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 RPS4Y2Q8TD47 263 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 MYCBPQ99417 103 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 TTTY10Q9BZA0 68 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 GPR173Q9NS66 373 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 OR52A1Q9UKL2 312 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 TBL2Q9Y4P3 447 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 PCDHGB5Q9Y5G0 923 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 R4GMQ9 66 aa10.82□□□□□ -0.68
CLSTN3-205ENST00000535452 IGKV1D-17A0A075B6S4 117 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 FAM230AA0A1W2PPH8 454 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 G3V2T6 193 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 SYT7O43581 403 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 XPNPEP2O43895 674 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 ARG1P05089 322 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 CHRM2P08172 466 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 AMY2BP19961 511 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 HCCSP53701 268 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 EMX1Q04741 257 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 PTGES3Q15185 160 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 CNN3Q15417 329 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 FAM189A2Q15884 450 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 NXNL2Q5VZ03 156 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 TRPM8Q7Z2W7 1104 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 ZDHHC13Q8IUH4 622 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 MKXQ8IYA7 352 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 ENTHD1Q8IYW4 607 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 OR4M1Q8NGD0 313 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 TNFRSF14Q92956 283 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 BORCS8Q96FH0 119 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 AKR1E2Q96JD6 320 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 CDCA4Q9BXL8 241 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 MEGF9Q9H1U4 602 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 C19orf12Q9NSK7 152 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 SLC22A13Q9Y226 551 aa10.81□□□□□ -0.68
CLSTN3-205ENST00000535452 KLHDC2Q9Y2U9 406 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms