RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 SLAMF6Q96DU3 332 aa6.94□□□□□ -1.3
RPUSD4-209ENST00000534393 CNN2Q99439 309 aaKnown RBP6.94□□□□□ -1.3
RPUSD4-209ENST00000534393 TBX5Q99593 518 aa6.94□□□□□ -1.3
RPUSD4-209ENST00000534393 MND1Q9BWT6 205 aa6.94□□□□□ -1.3
RPUSD4-209ENST00000534393 ADGRL4Q9HBW9 690 aa6.94□□□□□ -1.3
RPUSD4-209ENST00000534393 SMURF1Q9HCE7 757 aa6.94□□□□□ -1.3
RPUSD4-209ENST00000534393 CENPMQ9NSP4 180 aa6.94□□□□□ -1.3
RPUSD4-209ENST00000534393 ERVK13-1Q9NX77 482 aa6.94□□□□□ -1.3
RPUSD4-209ENST00000534393 RPUSD1Q9UJJ7 312 aaKnown RBP6.94□□□□□ -1.3
RPUSD4-209ENST00000534393 A0A0G2JK05 382 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 SMIM31A0A1B0GVY4 71 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 ZNF593O00488 134 aaPredicted RBP6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 NDUFB3O43676 98 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 SELENOFO60613 162 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 CLPXO76031 633 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 IGHA1P01876 353 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 FBP1P09467 338 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 OR2T7P0C7T2 308 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 LIMS3P0CW19 117 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 LIMS4P0CW20 117 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 HSD11B1P28845 292 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 GNALP38405 381 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 PRKXP51817 358 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 GP2P55259 537 aaKnown RBP6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 ACTC1P68032 377 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 ACTA1P68133 377 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 SPHARQ15513 63 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 TBCEQ15813 527 aaPredicted RBP6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 TAF9Q16594 264 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 SYT6Q5T7P8 510 aaPredicted RBP6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 GPR107Q5VW38 600 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 LYPD4Q6UWN0 246 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 TMPRSS11AQ6ZMR5 421 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 ZNF826PQ6ZT77 177 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 ZNF367Q7RTV3 350 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 SLC16A9Q7RTY1 509 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 DPY19L4Q7Z388 723 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 CLVS1Q8IUQ0 354 aaPredicted RBP6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 ERI1Q8IV48 349 aaKnown RBP6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 SLC35F2Q8IXU6 374 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 CSNK2A3Q8NEV1 391 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 OR13F1Q8NGS4 319 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 OR2T27Q8NH04 317 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 ST8SIA4Q92187 359 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 TAF15Q92804 592 aaKnown RBP eCLIP6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 OR5M11Q96RB7 305 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 FAM192AQ9GZU8 254 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 DNTTIP1Q9H147 329 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 RGCCQ9H4X1 137 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 ABCB9Q9NP78 766 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 INPP5EQ9NRR6 644 aa6.93□□□□□ -1.3
RPUSD4-209ENST00000534393 A0A0U1RQK1 487 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 A0A1W2PQL4 384 aaPredicted RBP6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 ANXA2P2A6NMY6 339 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 ZNF670-ZNF695F2Z2N8 137 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 TBX1O43435 398 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 IGHV4-59P01825 116 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 ANXA2P07355 339 aaKnown RBP6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 SLC2A1P11166 492 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 TGFBR2P37173 567 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 RPS27P42677 84 aaKnown RBP6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 GTF2A1P52655 376 aaPredicted RBP6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 WNT4P56705 351 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 PROK1P58294 105 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 FAM3AP98173 230 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 SRSF4Q08170 494 aaKnown RBP6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 GALEQ14376 348 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 LRRC10Q5BKY1 277 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 ATPAF1Q5TC12 328 aaPredicted RBP6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 OR2G6Q5TZ20 316 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 C1orf122Q6ZSJ8 110 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 VMO1Q7Z5L0 202 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 DTX3Q8N9I9 347 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 ZSCAN4Q8NAM6 433 aaPredicted RBP6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 LY6G5BQ8NDX9 201 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 OR1M1Q8NGA1 313 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 OR10Z1Q8NGY1 313 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 OR6N2Q8NGY6 317 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 OR5R1Q8NH85 324 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 LINC01006Q8NI28 216 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 LRRC29Q8WV35 223 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 ITFG2Q969R8 447 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 DGCR14Q96DF8 476 aaKnown RBP6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 MED30Q96HR3 178 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 INTS14Q96SY0 518 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 MYCBPQ99417 103 aaPredicted RBP6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 MGLLQ99685 303 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 MICU1Q9BPX6 476 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 ALG8Q9BVK2 526 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 JAM3Q9BX67 310 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 C16orf95Q9H693 158 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 TCF7L1Q9HCS4 588 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 N6AMT1Q9Y5N5 214 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 MPC1Q9Y5U8 109 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 CEPT1Q9Y6K0 416 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 PLXNB1O43157 2135 aa6.92□□□□□ -1.3
RPUSD4-209ENST00000534393 NKX6-3A6NJ46 265 aa6.91□□□□□ -1.3
RPUSD4-209ENST00000534393 TMEM210A6NLX4 147 aa6.91□□□□□ -1.3
RPUSD4-209ENST00000534393 J3QLW9 94 aa6.91□□□□□ -1.3
RPUSD4-209ENST00000534393 NOL3O60936 208 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms