RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 CMTM5Q96DZ9 223 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 RNF125Q96EQ8 232 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 DUS3LQ96G46 650 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 TMEM19Q96HH6 336 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 MED30Q96HR3 178 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 METTL2AQ96IZ6 378 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ITCHQ96J02 903 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 PPP3R2Q96LZ3 170 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF582Q96NG8 517 aaPredicted RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 NR1H4Q96RI1 486 aaPredicted RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 FUZQ9BT04 418 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 DCUN1D5Q9BTE7 237 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ABHD14AQ9BUJ0 271 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 MRPS26Q9BYN8 205 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 KCNN2Q9H2S1 579 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 RANBP3Q9H6Z4 567 aaPredicted RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ELOVL3Q9HB03 270 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 RETNQ9HD89 108 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 A4GALTQ9NPC4 353 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 SNTG1Q9NSN8 517 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 TMEM100Q9NV29 134 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 THAP1Q9NVV9 213 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 SELENONQ9NZV5 590 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 KIAA1456Q9P272 454 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 STX18Q9P2W9 335 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 LINC00527Q9UJ94 153 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 AURKCQ9UQB9 309 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ANGPT4Q9Y264 503 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 CAB39Q9Y376 341 aaPredicted RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 SMAD5-AS1Q9Y6J3 95 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 TANC2Q9HCD6 1990 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A0B4J2E0 115 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 TMEM272A0A1B0GTI8 110 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A1B0GX12 115 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A1W2PPH5 198 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 MCIDASD6RGH6 385 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 IFNL4K9M1U5 179 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 FBP2O00757 339 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 PRYO14603 147 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 IMPA2O14732 288 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 BIRC5O15392 142 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 PLIN3O60664 434 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 RAMP3O60896 148 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC22A3O75751 556 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 RHBDL1O75783 438 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 TNFAIP8O95379 198 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 FSTL3O95633 263 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ECDO95905 644 aaPredicted RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 FGF4P08620 206 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 HCKP08631 526 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 CST2P09228 141 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ALDOCP09972 364 aaKnown RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 UMPSP11172 480 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 MYCNOSP40205 109 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 HSPA13P48723 471 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 TGM4P49221 684 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ENTPD1P49961 510 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC18A1P54219 525 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 DNAJB13P59910 316 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ACTR3P61158 418 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 UFM1P61960 85 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ESRRGP62508 458 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 EMX2Q04743 252 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 DCTN2Q13561 401 aaKnown RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 CYLC2Q14093 348 aaPredicted RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 PCLAFQ15004 111 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 NEDD8Q15843 81 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 SSX2Q16385 188 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF74Q16587 644 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 DGUOKQ16854 277 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF181Q2M3W8 571 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 KCTD21Q4G0X4 260 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 AGKQ53H12 422 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 CCDC92Q53HC0 331 aaPredicted RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 C9orf152Q5JTZ5 239 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 C10orf128Q5T292 105 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ULK3Q6PHR2 472 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 METAP1DQ6UB28 335 aaPredicted RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM57BQ71RH2 274 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 OR2W3Q7Z3T1 314 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 GPR141Q7Z602 305 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 CLVS1Q8IUQ0 354 aaPredicted RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 EGFL6Q8IUX8 553 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 C1orf87Q8N0U7 546 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 C11orf42Q8N5U0 333 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 NATD1Q8N6N6 113 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF781Q8N8C0 355 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 LSMEM1Q8N8F7 131 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 NOXO1Q8NFA2 376 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 OR4D11Q8NGI4 311 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 OR9Q1Q8NGQ5 310 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 OR1F12Q8NHA8 337 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 NFKBIDQ8NI38 313 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 VANGL1Q8TAA9 524 aaPredicted RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 OIT3Q8WWZ8 545 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 VPS33AQ96AX1 596 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 ISOC1Q96CN7 298 aa2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 NOL4LQ96MY1 436 aaPredicted RBP2.32□□□□□ -2.04
CHMP4A-208ENST00000534106 CCDC115Q96NT0 180 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms