RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 PLATP00750 562 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 AVPP01185 164 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 LIPFP07098 398 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 GNAO1P09471 354 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 LIMS3P0CW19 117 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 LIMS4P0CW20 117 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 PRKACBP22694 351 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 CAPZA1P52907 286 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 IL13RA1P78552 427 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 STUMQ69YW2 141 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 RBMS3Q6XE24 437 aaKnown RBP11.13□□□□□ -0.63
CAPN1-227ENST00000533909 ZNF841Q6ZN19 808 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 Q6ZSR3 168 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 POC1AQ8NBT0 407 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 TMEM158Q8WZ71 300 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 SMURF1Q9HCE7 757 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 OPN4Q9UHM6 478 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 DIMT1Q9UNQ2 313 aaKnown RBP11.13□□□□□ -0.63
CAPN1-227ENST00000533909 CAB39Q9Y376 341 aaPredicted RBP11.13□□□□□ -0.63
CAPN1-227ENST00000533909 DOCK11Q5JSL3 2073 aa11.13□□□□□ -0.63
CAPN1-227ENST00000533909 ANK3Q12955 4377 aaKnown RBP11.12□□□□□ -0.63
CAPN1-227ENST00000533909 OR4C45A6NMZ5 311 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 GPR37O15354 613 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 SYNGR1O43759 233 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 NDUFB7P17568 137 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 TGM4P49221 684 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 ETV1P50549 477 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 ATP1B3P54709 279 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 PAX8Q06710 450 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 UBE2V2Q15819 145 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 C11orf91Q3C1V1 193 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 METTL11BQ5VVY1 283 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 C1orf229Q6ZS94 237 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-227ENST00000533909 BTN2A1Q7KYR7 527 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 ANGPTL5Q86XS5 388 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 STX19Q8N4C7 294 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 BPIFB6Q8NFQ5 453 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 H1FXQ92522 213 aaKnown RBP11.12□□□□□ -0.63
CAPN1-227ENST00000533909 ADAT3Q96EY9 351 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-227ENST00000533909 ZNF488Q96MN9 340 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 JAM3Q9BX67 310 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 SUCNR1Q9BXA5 334 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 PKIBQ9C010 78 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 DHDHQ9UQ10 334 aa11.12□□□□□ -0.63
CAPN1-227ENST00000533909 C22orf46C9J442 243 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 E9PI62 339 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 SLC1A7O00341 560 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 TNFRSF13BO14836 293 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-227ENST00000533909 RGS9O75916 674 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-227ENST00000533909 ZFPL1O95159 310 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 PGA5P0DJD9 388 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 RBP2P50120 134 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 MTCP1P56278 107 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 FGF12P61328 243 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 PAX2Q02962 417 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 ST3GAL4Q11206 333 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 CCDC58Q4VC31 144 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 ATPAF1Q5TC12 328 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-227ENST00000533909 RPL22L1Q6P5R6 122 aaKnown RBP11.11□□□□□ -0.63
CAPN1-227ENST00000533909 ACP7Q6ZNF0 438 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 UTS2BQ765I0 119 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 CMTM4Q8IZR5 234 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 BATF2Q8N1L9 274 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 TMEM185AQ8NFB2 350 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 OR51A4Q8NGJ6 313 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 OR13C9Q8NGT0 318 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 ANGPTL6Q8NI99 470 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 TFAP2CQ92754 450 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-227ENST00000533909 JMJD8Q96S16 334 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 PDCD1LG2Q9BQ51 273 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 PCGF1Q9BSM1 259 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 BABAM2Q9NXR7 383 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 ONECUT1Q9UBC0 465 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 SLC25A10Q9UBX3 287 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-227ENST00000533909 OR14J1Q9UGF5 321 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 NUP50Q9UKX7 468 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 STAB1Q9NY15 2570 aa11.11□□□□□ -0.63
CAPN1-227ENST00000533909 A0A0A6YYJ9 748 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 A0A1W2PQ09 198 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 ZNF879B4DU55 563 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 H0YJX3 145 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 MYL12BO14950 172 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 XPNPEP2O43895 674 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 INMTO95050 263 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 CD2P06729 351 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 ACAA1P09110 424 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-227ENST00000533909 PPIAL4GP0DN37 164 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 PSG2P11465 335 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 PIPP12273 146 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-227ENST00000533909 ATF1P18846 271 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 MPZP25189 248 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 AZGP1P25311 298 aaKnown RBP11.1□□□□□ -0.63
CAPN1-227ENST00000533909 POU3F4P49335 361 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 AQP4P55087 323 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 IL24Q13007 206 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 OR2G6Q5TZ20 316 aa11.1□□□□□ -0.63
CAPN1-227ENST00000533909 FIP1L1Q6UN15 594 aaKnown RBP11.1□□□□□ -0.63
CAPN1-227ENST00000533909 LHFPL2Q6ZUX7 228 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms