RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 CHID1Q9BWS9 393 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 NPFFR1Q9GZQ6 430 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 PBOV1Q9GZY1 135 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 RAB18Q9NP72 206 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 ARRDC5A6NEK1 342 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 ACOD1A6NK06 481 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 VGLL3A8MV65 326 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 CST1P01037 141 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 HMGN1P05114 100 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 PGA5P0DJD9 388 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 RAP2AP10114 183 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 PRKACGP22612 351 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 RIPPLY1Q0D2K3 151 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 APOFQ13790 326 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 SLC35D3Q5M8T2 416 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 PLCXD3Q63HM9 321 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 ADGRG5Q8IZF4 528 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 Q8N2B8 174 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 ZNF561Q8N587 486 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 OR8B4Q96RC9 309 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 YIPF3Q9GZM5 350 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 LAMP5Q9UJQ1 280 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 COPS3Q9UNS2 423 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 PIGLQ9Y2B2 252 aa14.57□□□□□ -0.08
UBXN1-216ENST00000533908 MEX3AA1L020 520 aaKnown RBP14.56□□□□□ -0.08
UBXN1-216ENST00000533908 A6NDX4 124 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 CCDC182A6NF36 153 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 C17orf98A8MV24 154 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 PIN1P1O15428 100 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 NOS1APO75052 506 aaPredicted RBP14.56□□□□□ -0.08
UBXN1-216ENST00000533908 ALX3O95076 343 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 TTRP02766 147 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 OSMP13725 252 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 ATP6V1B1P15313 513 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 JUNBP17275 347 aaPredicted RBP14.56□□□□□ -0.08
UBXN1-216ENST00000533908 RPS7P62081 194 aaKnown RBP14.56□□□□□ -0.08
UBXN1-216ENST00000533908 MFGE8Q08431 387 aaPredicted RBP14.56□□□□□ -0.08
UBXN1-216ENST00000533908 DEGS2Q6QHC5 323 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 CITED2Q99967 270 aaPredicted RBP14.56□□□□□ -0.08
UBXN1-216ENST00000533908 NRIP2Q9BQI9 281 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 TTTY10Q9BZA0 68 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 MUC13Q9H3R2 512 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 USE1Q9NZ43 259 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 TCF19Q9Y242 345 aa14.56□□□□□ -0.08
UBXN1-216ENST00000533908 MAGEB4O15481 346 aaPredicted RBP14.55□□□□□ -0.08
UBXN1-216ENST00000533908 GSC2O15499 205 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 FBXO24O75426 580 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 SRSF10O75494 262 aaKnown RBP14.55□□□□□ -0.08
UBXN1-216ENST00000533908 DCTN3O75935 186 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 NRASP01111 189 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 TK1P04183 234 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 MRPL3P09001 348 aaKnown RBP14.55□□□□□ -0.08
UBXN1-216ENST00000533908 PIPP12273 146 aaPredicted RBP14.55□□□□□ -0.08
UBXN1-216ENST00000533908 HAAOP46952 286 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 LGALS4P56470 323 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 ROM1Q03395 351 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 SMIM21Q3B7S5 101 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 ZBTB37Q5TC79 503 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 TMEM42Q69YG0 159 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 LIAT1Q6ZQX7 453 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 REC114Q7Z4M0 266 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 COMMD2Q86X83 199 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 TMEM219Q86XT9 240 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 ARHGAP24Q8N264 748 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 MRAPQ8TCY5 172 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 CDCA4Q9BXL8 241 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 HES4Q9HCC6 221 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 GPR173Q9NS66 373 aa14.55□□□□□ -0.08
UBXN1-216ENST00000533908 PQLC2LA1A4F0 135 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 A6NIN4 97 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 J3QT63 122 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 SLC1A7O00341 560 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 T-ENOLP0DO92 83 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 LOXL3P58215 753 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 EMX1Q04741 257 aaPredicted RBP14.54□□□□□ -0.08
UBXN1-216ENST00000533908 GK3PQ14409 553 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 KCTD18Q6PI47 426 aaPredicted RBP14.54□□□□□ -0.08
UBXN1-216ENST00000533908 ANGPTL5Q86XS5 388 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 CALHM1Q8IU99 346 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 ZNF679Q8IYX0 411 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 CANT1Q8WVQ1 401 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 ITFG2Q969R8 447 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 R3HDM4Q96D70 268 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 NSL1Q96IY1 281 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 OR5M11Q96RB7 305 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 WNT10AQ9GZT5 417 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 C1orf21Q9H246 121 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 AURKAIP1Q9NWT8 199 aaPredicted RBP14.54□□□□□ -0.08
UBXN1-216ENST00000533908 OR14J1Q9UGF5 321 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 NUFIP1Q9UHK0 495 aaKnown RBP14.54□□□□□ -0.08
UBXN1-216ENST00000533908 ENPP5Q9UJA9 477 aa14.54□□□□□ -0.08
UBXN1-216ENST00000533908 A0A1B0GTI1 187 aa14.53□□□□□ -0.08
UBXN1-216ENST00000533908 A0A1W2PPH5 198 aa14.53□□□□□ -0.08
UBXN1-216ENST00000533908 ODF3BA8MYP8 253 aa14.53□□□□□ -0.08
UBXN1-216ENST00000533908 F8VVB4 439 aa14.53□□□□□ -0.08
UBXN1-216ENST00000533908 F8VWA3 439 aa14.53□□□□□ -0.08
UBXN1-216ENST00000533908 NXPH2O95156 264 aa14.53□□□□□ -0.08
UBXN1-216ENST00000533908 MNAT1P51948 309 aa14.53□□□□□ -0.08
UBXN1-216ENST00000533908 ERVK11-1P61568 191 aa14.53□□□□□ -0.08
UBXN1-216ENST00000533908 BLCAPP62952 87 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms