RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SYNGR1O43759 233 aa24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 GABRB1P18505 474 aa24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 ACP7Q6ZNF0 438 aa24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 C8orf46Q8TAG6 207 aa24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 GATAD2BQ8WXI9 593 aa24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 LHX4Q969G2 390 aa24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 RNF166Q96A37 237 aaPredicted RBP24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 SLC25A28Q96A46 364 aa24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 EXOGQ9Y2C4 368 aaKnown RBP24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 POLDIP2Q9Y2S7 368 aa24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 PCDHGB1Q9Y5G3 927 aa24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 RNASE1P07998 156 aaKnown RBP24.96■■□□□ 1.59
SSSCA1-207ENST00000533115 UBCP0CG48 685 aaKnown RBP24.96■■□□□ 1.59
SSSCA1-207ENST00000533115 PGA5P0DJD9 388 aa24.96■■□□□ 1.59
SSSCA1-207ENST00000533115 KIR3DL2P43630 455 aa24.96■■□□□ 1.59
SSSCA1-207ENST00000533115 VMO1Q7Z5L0 202 aa24.96■■□□□ 1.59
SSSCA1-207ENST00000533115 ENTHD1Q8IYW4 607 aa24.96■■□□□ 1.59
SSSCA1-207ENST00000533115 KIR3DL3Q8N743 410 aa24.96■■□□□ 1.59
SSSCA1-207ENST00000533115 ZNF488Q96MN9 340 aa24.96■■□□□ 1.59
SSSCA1-207ENST00000533115 IGHV1-69DA0A0B4J2H0 117 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 LOC107986453A0A1B0GWG9 222 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 NOS1APO75052 506 aaPredicted RBP24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 IGHV1-69P01742 117 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 NDUFB7P17568 137 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 CAV3P56539 151 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 SMIM21Q3B7S5 101 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 CMTM4Q8IZR5 234 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 ZDHHC16Q969W1 377 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 LGALS12Q96DT0 336 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 SDSLQ96GA7 329 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 SLC7A11Q9UPY5 501 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 MAB21L2Q9Y586 359 aa24.95■■□□□ 1.58
SSSCA1-207ENST00000533115 LOC100130705A0A1B0GUX0 176 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 SLC16A6O15403 523 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 MPZL2O60487 215 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 BAG2O95816 211 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 HKR1P10072 659 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 MPZP25189 248 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 CFPP27918 469 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 OR12D2P58182 307 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 UBE2V2Q15819 145 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 RDH10Q8IZV5 341 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 ACBD7Q8N6N7 88 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 ZNRF1Q8ND25 227 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 OR2G2Q8NGZ5 317 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 RHOXF1Q8NHV9 184 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 TRMT10AQ8TBZ6 339 aaKnown RBP24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 NOX4Q9NPH5 578 aa24.94■■□□□ 1.58
SSSCA1-207ENST00000533115 FAM230AA0A1W2PPH8 454 aa24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 GATBO75879 557 aaKnown RBP24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 ZNF91Q05481 1191 aa24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 ANGPTL5Q86XS5 388 aa24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 CALHM1Q8IU99 346 aa24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 C10orf35Q96D05 121 aa24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 Q96MT0 163 aa24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 NRIP2Q9BQI9 281 aa24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 PKIBQ9C010 78 aa24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 CHST5Q9GZS9 411 aa24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 FAM118AQ9NWS6 357 aa24.93■■□□□ 1.58
SSSCA1-207ENST00000533115 RFPL4AA6NLU0 287 aa24.92■■□□□ 1.58
SSSCA1-207ENST00000533115 RFPL4AL1F8VTS6 287 aa24.92■■□□□ 1.58
SSSCA1-207ENST00000533115 HOXA3O43365 443 aaPredicted RBP24.92■■□□□ 1.58
SSSCA1-207ENST00000533115 DBTP11182 482 aaKnown RBP24.92■■□□□ 1.58
SSSCA1-207ENST00000533115 TMEM244Q5VVB8 128 aa24.92■■□□□ 1.58
SSSCA1-207ENST00000533115 FDX2Q6P4F2 183 aa24.92■■□□□ 1.58
SSSCA1-207ENST00000533115 TMEM185AQ8NFB2 350 aa24.92■■□□□ 1.58
SSSCA1-207ENST00000533115 NPRL2Q8WTW4 380 aa24.92■■□□□ 1.58
SSSCA1-207ENST00000533115 STMN2Q93045 179 aa24.92■■□□□ 1.58
SSSCA1-207ENST00000533115 FRRS1LQ9P0K9 344 aa24.92■■□□□ 1.58
SSSCA1-207ENST00000533115 NXPH2O95156 264 aa24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 SERPINA3P01011 423 aa24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 IL24Q13007 206 aa24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 AWAT1Q58HT5 328 aa24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 Q6YL49 198 aa24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 PDZD9Q8IXQ8 264 aa24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 CD177Q8N6Q3 437 aa24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 Q8N7P7 452 aa24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 C3orf56Q8N813 242 aa24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 ELL3Q9HB65 397 aaPredicted RBP24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 HES4Q9HCC6 221 aa24.91■■□□□ 1.58
SSSCA1-207ENST00000533115 J3QLW9 94 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 HTR1AP08908 422 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 ZNF19P17023 458 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 PRDX2P32119 198 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 FUT6P51993 359 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 NANOS3P60323 173 aaKnown RBP24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 ACTA2P62736 377 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 ACTG2P63267 376 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 FOXL1Q12952 345 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 ZSCAN26Q16670 478 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 METAP1DQ6UB28 335 aaPredicted RBP24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 BATF2Q8N1L9 274 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 PP6455Q8WZ26 134 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 MRPL48Q96GC5 212 aaKnown RBP24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 MYCBPQ99417 103 aaPredicted RBP24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 SIRT7Q9NRC8 400 aa24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.9■■□□□ 1.58
SSSCA1-207ENST00000533115 A0A1W2PQ09 198 aa24.89■■□□□ 1.58
SSSCA1-207ENST00000533115 ISG15P05161 165 aa24.89■■□□□ 1.58
SSSCA1-207ENST00000533115 CCR9P51686 369 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms