RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 HNRNPA0Q13151 305 aaKnown RBP9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 INSL4Q14641 139 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 KCNJ8Q15842 424 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 SSX1Q16384 188 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 ZNF529Q6P280 563 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 LRRC28Q86X40 367 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 S100ZQ8WXG8 99 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 AQP3Q92482 292 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 PHYHIPQ92561 330 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 ORAI1Q96D31 301 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 CPNE2Q96FN4 548 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 PKIBQ9C010 78 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 METTL17Q9H7H0 456 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 PALMDQ9NP74 551 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 POLDIP2Q9Y2S7 368 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 SF3B6Q9Y3B4 125 aaKnown RBP9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 IGKV1-27A0A075B6S5 117 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 TRAV38-1A0A0B4J264 116 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 MEGF11A6BM72 1044 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 H7C1Q1 480 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 PIN1P1O15428 100 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 SYNGR1O43759 233 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 RHBDL1O75783 438 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 SC5DO75845 299 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 ARL6IP5O75915 188 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 RGS9O75916 674 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 ZNF205O95201 554 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 HEXAP06865 529 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 ACAA1P09110 424 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 IGFBP3P17936 291 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 BDKRB2P30411 391 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 MDH2P40926 338 aaKnown RBP9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 GP2P55259 537 aaKnown RBP9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 LOXL1Q08397 574 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 IL24Q13007 206 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 KISS1Q15726 138 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 HSD17B12Q53GQ0 312 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 FAM201AQ5SY85 155 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 SFRP4Q6FHJ7 346 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 ASPHD2Q6ICH7 369 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 TMEM91Q6ZNR0 172 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 CALHM1Q8IU99 346 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 MKXQ8IYA7 352 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 MUC20Q8N307 709 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 GCSAMQ8N6F7 178 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 DEFB108BQ8NET1 73 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 OR52N4Q8NGI2 321 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 OR51A2Q8NGJ7 313 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 YIPF6Q96EC8 236 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 GPER1Q99527 375 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 SLITRK2Q9H156 845 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 NARFLQ9H6Q4 476 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 PLGRKTQ9HBL7 147 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 TMEM165Q9HC07 324 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 TCF7L1Q9HCS4 588 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 NDUFB11Q9NX14 153 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 RASL12Q9NYN1 266 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 TEX15Q9BXT5 2789 aa9.44□□□□□ -0.9
TRAPPC4-211ENST00000533012 PRRC2AP48634 2157 aaKnown RBP9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 TRAV8-7A0A075B6U6 113 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 IGHV4-61A0A0C4DH41 118 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 TRDV1A0A1B0GX56 115 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 OOEPA6NGQ2 149 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 SRRM5B3KS81 715 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 LGALS8O00214 317 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 GABRPO00591 440 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 WNT9BO14905 357 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 AKR7A2O43488 359 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 NDUFA2O43678 99 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 NOS1APO75052 506 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 CLPXO76031 633 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 PLATP00750 562 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 IGHV2-70P01814 119 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 MAS1P04201 325 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 UCHL1P09936 223 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 CD99P14209 185 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 MUC1P15941 1255 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 CD36P16671 472 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 SRMP19623 302 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 FSTP19883 344 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 GALP22466 123 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 GLRA1P23415 457 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 MPZP25189 248 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 ZNF93P35789 620 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 GMFBP60983 142 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 FABP5Q01469 135 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 PDZK1IP1Q13113 114 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 ZMYND11Q15326 602 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 MICBQ29980 383 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 TMEM155Q4W5P6 130 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 DDI2Q5TDH0 399 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 GDPGP1Q6ZNW5 385 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 USP43Q70EL4 1123 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 SLC25A26Q70HW3 274 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 CDH26Q8IXH8 852 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 SPICQ8N5J4 248 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 OR51F2Q8NH61 342 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 BORCS5Q969J3 196 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 RFT1Q96AA3 541 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms