RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 VCX3AQ9NNX9 186 aa5.81□□□□□ -1.48
TRIM53CP-201ENST00000531490 MMP26Q9NRE1 261 aa5.81□□□□□ -1.48
TRIM53CP-201ENST00000531490 AURKAIP1Q9NWT8 199 aaPredicted RBP5.81□□□□□ -1.48
TRIM53CP-201ENST00000531490 CLN6Q9NWW5 311 aa5.81□□□□□ -1.48
TRIM53CP-201ENST00000531490 FAM206AQ9NX38 181 aa5.81□□□□□ -1.48
TRIM53CP-201ENST00000531490 HAO2Q9NYQ3 351 aa5.81□□□□□ -1.48
TRIM53CP-201ENST00000531490 MRPL15Q9P015 296 aaKnown RBP5.81□□□□□ -1.48
TRIM53CP-201ENST00000531490 MRM2Q9UI43 246 aaKnown RBP5.81□□□□□ -1.48
TRIM53CP-201ENST00000531490 SLC22A13Q9Y226 551 aa5.81□□□□□ -1.48
TRIM53CP-201ENST00000531490 SOX21Q9Y651 276 aaPredicted RBP5.81□□□□□ -1.48
TRIM53CP-201ENST00000531490 A0A0G2JMP0 313 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 A0A0X1KG70 313 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 DPPA5A6NC42 116 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 DNAJC9-AS1A6NH13 148 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 A6NIN4 97 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF850A8MQ14 1090 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 H3BSH0 61 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 MRPS14O60783 128 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 FAM20BO75063 409 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 RPP14O95059 124 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 APOC1P02654 83 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 TTRP02766 147 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 WNT2P09544 360 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 MDKP21741 143 aaPredicted RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 HTR1FP30939 366 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 DDOSTP39656 456 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 CDC42P60953 191 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 BTG1P62324 171 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF85Q03923 595 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 SLC3A1Q07837 685 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR8B8Q15620 311 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF684Q5T5D7 378 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 LCN1P1Q5VSP4 162 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 DEGS2Q6QHC5 323 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ENTHD1Q8IYW4 607 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 BOLLQ8N9W6 283 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR4M2Q8NGB6 313 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 RHOXF1Q8NHV9 184 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 NANPQ8TBE9 248 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR51E1Q8TCB6 317 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 TRUB1Q8WWH5 349 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PIGCQ92535 297 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 SEH1LQ96EE3 360 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF48Q96MX3 618 aaPredicted RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 CNN2Q99439 309 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 TMEM246Q9BRR3 403 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ADAT1Q9BUB4 502 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PRRG3Q9BZD7 231 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PBOV1Q9GZY1 135 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 IFT22Q9H7X7 185 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PATZ1Q9HBE1 687 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 AMBNQ9NP70 447 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 C1orf123Q9NWV4 160 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 SCN3BQ9NY72 215 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 WARS2Q9UGM6 360 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 IKZF2Q9UKS7 526 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 TMEM14AQ9Y6G1 99 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PPIAL4EA0A075B759 164 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 A0A1B0GTI1 187 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ANKRD30BLA7E2S9 258 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 CEACAM18A8MTB9 384 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF670-ZNF695F2Z2N8 137 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PPIAL4DF5H284 164 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 J3QRE1 110 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 TNFRSF13BO14836 293 aaPredicted RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 MPZL2O60487 215 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF254O75437 659 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 FCN3O75636 299 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PTBP3O95758 552 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 CLIC3O95833 236 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 LHBP01229 141 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 IGLV3-1P01715 115 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 SLPIP03973 132 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 CCDC159P0C7I6 412 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR2T7P0C7T2 308 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PPIAL4FP0DN26 164 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PRTN3P24158 256 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 DCTDP32321 178 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ATP6V1E1P36543 226 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PSMB10P40306 273 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 RIDAP52758 137 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 GABARAPL2P60520 117 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 SNRPGP62308 76 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF154Q13106 437 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PRDX4Q13162 271 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 PDCD1Q15116 288 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 SMN1Q16637 294 aaKnown RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ODF4Q2M2E3 257 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF181Q2M3W8 571 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 TMEM155Q4W5P6 130 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 CEP78Q5JTW2 689 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 SLC25A30Q5SVS4 291 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF691Q5VV52 312 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 DCAF12L2Q5VW00 463 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 GID4Q8IVV7 300 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 RDH10Q8IZV5 341 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 GCSAMQ8N6F7 178 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR10H4Q8NGA5 316 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR2T27Q8NH04 317 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ASB17Q8WXJ9 295 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms