RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 VMACQ2NL98 169 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 KLHL12Q53G59 568 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 LCN8Q6JVE9 175 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 KCTD8Q6ZWB6 473 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 CALHM1Q8IU99 346 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 COMMD1Q8N668 190 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 OR4P4Q8NGL7 312 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 OR4C15Q8NGM1 316 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 OR2T27Q8NH04 317 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 RNFT2Q96EX2 444 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 REEP6Q96HR9 211 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 SPATA25Q9BR10 227 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 C1orf21Q9H246 121 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 KAT8Q9H7Z6 458 aaKnown RBP6.44□□□□□ -1.38
CD44-232ENST00000531118 MRPL22Q9NWU5 206 aaKnown RBP6.44□□□□□ -1.38
CD44-232ENST00000531118 CCDC167Q9P0B6 97 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 B9D1Q9UPM9 204 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 MOB4Q9Y3A3 225 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 RHBDD3Q9Y3P4 386 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 N6AMT1Q9Y5N5 214 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 IER3IP1Q9Y5U9 82 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 HSPE1-MOB4S4R3N1 261 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 A0A087WUU8 490 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 MEX3AA1L020 520 aaKnown RBP6.43□□□□□ -1.38
CD44-232ENST00000531118 M0QZK8 103 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 SLC1A7O00341 560 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 MTRF1O75570 445 aaKnown RBP6.43□□□□□ -1.38
CD44-232ENST00000531118 HLA-DQA2P01906 255 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 ZNF823P16415 610 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 INSL3P51460 131 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 RPS6KA3P51812 740 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 FXYD6P3P58550 94 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 ACTA2P62736 377 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 ACTG2P63267 376 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 ACTC1P68032 377 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 ACTA1P68133 377 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 PRDX4Q13162 271 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 TRAM2Q15035 370 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 TIGD6Q17RP2 521 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 SLC35F1Q5T1Q4 408 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 FAM27D1Q5T7N8 215 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 TCF23Q7RTU1 214 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 CD177Q8N6Q3 437 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 CSNK2A3Q8NEV1 391 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 OR10A6Q8NH74 314 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 CGREF1Q99674 301 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 FN3KQ9H479 309 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 ABCB9Q9NP78 766 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 RPRD1BQ9NQG5 326 aaKnown RBP6.43□□□□□ -1.38
CD44-232ENST00000531118 THAP1Q9NVV9 213 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 RHCGQ9UBD6 479 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 LINC00527Q9UJ94 153 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 KCNG2Q9UJ96 466 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 SIGLEC7Q9Y286 467 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 SIRT4Q9Y6E7 314 aaPredicted RBP6.43□□□□□ -1.38
CD44-232ENST00000531118 KIAA2026Q5HYC2 2103 aa6.43□□□□□ -1.38
CD44-232ENST00000531118 RFPL4AA6NLU0 287 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 ZNF850A8MQ14 1090 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 RFPL4AL1F8VTS6 287 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 J3KTA2 159 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 SLC22A2O15244 555 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 SLC25A17O43808 307 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 DNAJC8O75937 253 aaPredicted RBP6.42□□□□□ -1.38
CD44-232ENST00000531118 ZNF728P0DKX0 622 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 GP9P14770 177 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 SPNP16150 400 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 BRS3P32247 399 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 IFNA8P32881 189 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 GZMMP51124 257 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 SLC35B1P78383 322 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 KIR2DS1Q14954 304 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 GFOD2Q3B7J2 385 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 SMIM21Q3B7S5 101 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 LRRC23Q53EV4 343 aaPredicted RBP6.42□□□□□ -1.38
CD44-232ENST00000531118 ZNF730Q6ZMV8 503 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 ACP7Q6ZNF0 438 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 LCNL1Q6ZST4 164 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 MBOAT2Q6ZWT7 520 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 ZNF561Q8N587 486 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 IL17DQ8TAD2 202 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 OR5P3Q8WZ94 311 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 LZICQ8WZA0 190 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 RSRC1Q96IZ7 334 aaKnown RBP6.42□□□□□ -1.38
CD44-232ENST00000531118 CDRT15Q96T59 188 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 NMNAT3Q96T66 252 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 KCNJ15Q99712 375 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 PAIP2Q9BPZ3 127 aaKnown RBP6.42□□□□□ -1.38
CD44-232ENST00000531118 CLEC7AQ9BXN2 247 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 DCLRE1BQ9H816 532 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 SP140LQ9H930 580 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 PFDN2Q9UHV9 154 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 TMEM5Q9Y2B1 443 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 MPC1Q9Y5U8 109 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 SESN1Q9Y6P5 492 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 DNAH2Q9P225 4427 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 DNAH17Q9UFH2 4485 aa6.42□□□□□ -1.38
CD44-232ENST00000531118 SERPINE3A8MV23 424 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 ZNF878C9JN71 531 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 PRODHO43272 600 aa6.41□□□□□ -1.38
CD44-232ENST00000531118 PTP4A3O75365 173 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms