RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 PRR13Q9NZ81 148 aa7.16□□□□□ -1.26
CSDE1-214ENST00000530886 HSF4Q9ULV5 492 aa7.16□□□□□ -1.26
CSDE1-214ENST00000530886 F6UZH7 168 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 SCDO00767 359 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 NRG2O14511 850 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-214ENST00000530886 PITX3O75364 302 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 OR2J2O76002 312 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 NBEAP1P0C6P0 100 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 ACAA2P42765 397 aaKnown RBP7.15□□□□□ -1.26
CSDE1-214ENST00000530886 MTCP1P56278 107 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 ACSF3Q4G176 576 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-214ENST00000530886 DCST2Q5T1A1 773 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 ZNF321PQ8N8H1 164 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 OR4D6Q8NGJ1 314 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 GABRG3Q99928 467 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 REPIN1Q9BWE0 567 aaKnown RBP7.15□□□□□ -1.26
CSDE1-214ENST00000530886 MKKSQ9NPJ1 570 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-214ENST00000530886 CGGBP1Q9UFW8 167 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-214ENST00000530886 AK3Q9UIJ7 227 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 NSG1A0A0A6YYJ2 146 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 FOXS1O43638 330 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 PTGER4P35408 488 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 RBMXP38159 391 aaKnown RBP7.15□□□□□ -1.26
CSDE1-214ENST00000530886 CNN1P51911 297 aaKnown RBP7.15□□□□□ -1.26
CSDE1-214ENST00000530886 Q6ZVL8 140 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 OR1L6Q8NGR2 347 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 OTOSQ8NHW6 89 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 ADAMTS18Q8TE60 1221 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 NUDT11Q96G61 164 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 LPAR4Q99677 370 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 TMEM106BQ9NUM4 274 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 OR6C3Q9NZP0 311 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 RNF150Q9ULK6 438 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 ST3GAL6Q9Y274 331 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 COX11Q9Y6N1 276 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 ZNF780BQ9Y6R6 833 aa7.15□□□□□ -1.26
CSDE1-214ENST00000530886 FEZF1A0PJY2 475 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 MAP1LC3B2A6NCE7 125 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 GLOD5A6NK44 160 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 TMEM14DPA8MWL7 114 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 HSD11B1P28845 292 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 VASPP50552 380 aaPredicted RBP7.15□□□□□ -1.27
CSDE1-214ENST00000530886 PAFAH1B2P68402 229 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 FOXK1P85037 733 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 FHL5Q5TD97 284 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 C1QL3Q5VWW1 255 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 ASTLQ6HA08 431 aaPredicted RBP7.15□□□□□ -1.27
CSDE1-214ENST00000530886 SLC8B1Q6J4K2 584 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 ABHD17CQ6PCB6 329 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 OR2G3Q8NGZ4 309 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 MS4A10Q96PG2 267 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 MAP1LC3BQ9GZQ8 125 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF319Q9P2F9 582 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 TAC3Q9UHF0 121 aa7.15□□□□□ -1.27
CSDE1-214ENST00000530886 MRPS2Q9Y399 296 aaKnown RBP7.15□□□□□ -1.27
CSDE1-214ENST00000530886 LSM5Q9Y4Y9 91 aaKnown RBP7.15□□□□□ -1.27
CSDE1-214ENST00000530886 TRAV30A0A087WSZ9 112 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 CRYM-AS1A6NIL9 109 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 SRSF10O75494 262 aaKnown RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 APBA3O96018 575 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 TCN2P20062 427 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 TFPI2P48307 235 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 RPL23AP62750 156 aaKnown RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 CSNK1G2P78368 415 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 ENDOGQ14249 297 aaKnown RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 NUMA1Q14980 2115 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 C9orf50Q5SZB4 431 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 C22orf39Q6P5X5 142 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF880Q6PDB4 577 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 NRSN1Q8IZ57 195 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 VN1R2Q8NFZ6 395 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 HOXB13Q92826 284 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 GNPNAT1Q96EK6 184 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 SLC25A44Q96H78 314 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 IL17FQ96PD4 163 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 HIF3AQ9Y2N7 669 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 REV3LO60673 3130 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 TIAF1O95411 115 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 AHSA1O95433 338 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 TIMP1P01033 207 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 OR5G3P0C626 314 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 GNB3P16520 340 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 GZMHP20718 246 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 DTYMKP23919 212 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 ATP6V0CP27449 155 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 SRP14P37108 136 aaKnown RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 CTRLP40313 264 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 TAS2R46P59540 309 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 GNB2P62879 340 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 LCN2P80188 198 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 RHOGP84095 191 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 RPL19P84098 196 aaKnown RBP7.14□□□□□ -1.27
CSDE1-214ENST00000530886 C20orf196Q8IYI0 205 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 FBXL14Q8N1E6 418 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 STPG4Q8N801 248 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF738Q8NE65 137 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 OR4B1Q8NGF8 309 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 OR5H2Q8NGV7 314 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 SMIM12Q96EX1 92 aa7.14□□□□□ -1.27
CSDE1-214ENST00000530886 BTF3L4Q96K17 158 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms