RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	BBS1	Q8NFJ9	593 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	OR51E1	Q8TCB6	317 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	NSL1	Q96IY1	281 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	CDCA4	Q9BXL8	241 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	PBOV1	Q9GZY1	135 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	C1orf21	Q9H246	121 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	GPR84	Q9NQS5	396 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	NUFIP1	Q9UHK0	495 aa	Known RBP	12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	PIGL	Q9Y2B2	252 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	POLDIP2	Q9Y2S7	368 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ZNF281	Q9Y2X9	895 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	TMEM14A	Q9Y6G1	99 aa		12.64	□□□□□ -0.39
TM9SF1-209	ENST00000530468	VGLL3	A8MV65	326 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468		J3QT63	122 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	XPNPEP2	O43895	674 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	CHST1	O43916	411 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	NOS1AP	O75052	506 aa	Predicted RBP	12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	DHRS3	O75911	302 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	NRAS	P01111	189 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	PGA5	P0DJD9	388 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	VSIG10L2	P0DP72	767 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	FAH	P16930	419 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	BMX	P51813	675 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	GNGT1	P63211	74 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ROM1	Q03395	351 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	APOF	Q13790	326 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	FAM189A2	Q15884	450 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	DMRTC1	Q5HYR2	192 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ZNF679	Q8IYX0	411 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	OR4S1	Q8NGB4	309 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	OR2T27	Q8NH04	317 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	PIFO	Q8TCI5	191 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ASB17	Q8WXJ9	295 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	FOXRED1	Q96CU9	486 aa	Predicted RBP	12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	SLC25A19	Q9HC21	320 aa		12.63	□□□□□ -0.39
TM9SF1-209	ENST00000530468	FAM90A8P	A6NJQ4	464 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	PSMD9	O00233	223 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	PIN1P1	O15428	100 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	SYNGR1	O43759	233 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	FBXO24	O75426	580 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	E2F6	O75461	281 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	NXPH2	O95156	264 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ANXA8	P13928	327 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	COX7A1	P24310	79 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	PAX6	P26367	422 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	HAAO	P46952	286 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	RIDA	P52758	137 aa	Known RBP	12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	HCCS	P53701	268 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	EMX1	Q04741	257 aa	Predicted RBP	12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	CLVS2	Q5SYC1	327 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	TMEM179B	Q7Z7N9	219 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ADGRG5	Q8IZF4	528 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468		Q8N2B8	174 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	OR4M1	Q8NGD0	313 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	CCDC124	Q96CT7	223 aa	Known RBP	12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	OR8B4	Q96RC9	309 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	TEAD3	Q99594	435 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	NKX3-1	Q99801	234 aa	Predicted RBP	12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	MOB1A	Q9H8S9	216 aa		12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	TBL2	Q9Y4P3	447 aa	Known RBP	12.62	□□□□□ -0.39
TM9SF1-209	ENST00000530468	AQP12B	A6NM10	295 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	DLGAP1	O14490	977 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	TK1	P04183	234 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	CCL3L1	P16619	93 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	CALB2	P22676	271 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ZNF273	Q14593	569 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	SNAPC1	Q16533	368 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	TMEM42	Q69YG0	159 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468		Q6ZPA2	131 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	NDUFA11	Q86Y39	141 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	AQP12A	Q8IXF9	295 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	CANT1	Q8WVQ1	401 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ZNF488	Q96MN9	340 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	NRIP2	Q9BQI9	281 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ZNF702P	Q9H963	129 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	HES4	Q9HCC6	221 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ABCB10	Q9NRK6	738 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	PITPNC1	Q9UKF7	332 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	TCF19	Q9Y242	345 aa		12.61	□□□□□ -0.39
TM9SF1-209	ENST00000530468	PQLC2L	A1A4F0	135 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	MEGF11	A6BM72	1044 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	C17orf98	A8MV24	154 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	RBP4	P02753	201 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	TTR	P02766	147 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	MRPL3	P09001	348 aa	Known RBP	12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	MPZ	P25189	248 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	CEBPD	P49716	269 aa	Predicted RBP	12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ACTR3	P61158	418 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	CNN3	Q15417	329 aa	Known RBP	12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	NSUN5P1	Q3KNT7	163 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	TMEM236	Q5W0B7	351 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	HIST2H2BD	Q6DRA6	164 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	ZNF782	Q6ZMW2	699 aa	Predicted RBP	12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	LHFPL4	Q7Z7J7	247 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	OR4F17	Q8NGA8	305 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	OR13D1	Q8NGV5	346 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	RPS4Y2	Q8TD47	263 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	DNAJC9	Q8WXX5	260 aa		12.6	□□□□□ -0.39
TM9SF1-209	ENST00000530468	MALSU1	Q96EH3	234 aa		12.6	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms