RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ZNF773Q6PK81 442 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF322Q6U7Q0 402 aaPredicted RBP7.02□□□□□ -1.29
SSBP3-212ENST00000528930 LYPD2Q6UXB3 125 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF841Q6ZN19 808 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF826PQ6ZT77 177 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 KRT74Q7RTS7 529 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 C1QL2Q7Z5L3 287 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 GID4Q8IVV7 300 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 SLC35F2Q8IXU6 374 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 C1orf87Q8N0U7 546 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 BPIFB2Q8N4F0 458 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 GCSAMQ8N6F7 178 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 DEFB108BQ8NET1 73 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 CSNK2A3Q8NEV1 391 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 OR1M1Q8NGA1 313 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 OR8J1Q8NGP2 316 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 OR11L1Q8NGX0 322 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 ASB17Q8WXJ9 295 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 PPP1R14AQ96A00 147 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 DACT3Q96B18 629 aaPredicted RBP7.02□□□□□ -1.29
SSBP3-212ENST00000528930 TTTY10Q9BZA0 68 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 FGF23Q9GZV9 251 aaPredicted RBP7.02□□□□□ -1.29
SSBP3-212ENST00000528930 PBOV1Q9GZY1 135 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 RIBC2Q9H4K1 309 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 C1orf123Q9NWV4 160 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 GAR1Q9NY12 217 aaKnown RBP7.02□□□□□ -1.29
SSBP3-212ENST00000528930 MIOXQ9UGB7 285 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 TMEM14AQ9Y6G1 99 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 A3GALT2U3KPV4 340 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 A0A0U1RQV5 110 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 A0A1B0GUS0 222 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 RBMY1BA6NDE4 496 aaKnown RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 RBMY1EA6NEQ0 496 aaKnown RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 LGALS8O00214 317 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 CST4P01036 141 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 KNG1P01042 644 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 FSHBP01225 129 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 RBMY1DP0C7P1 496 aaKnown RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 IRF2P14316 349 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 RPS2P15880 293 aaKnown RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 ADRA2CP18825 462 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 HTR1FP30939 366 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 CAPGP40121 348 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 EIF2B2P49770 351 aaKnown RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 ALDH3A2P51648 485 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 RIDAP52758 137 aaKnown RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 GABARAPL2P60520 117 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 PAX8Q06710 450 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 MFGE8Q08431 387 aaPredicted RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 MZT1Q08AG7 82 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF154Q13106 437 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 TRIM16LQ309B1 348 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 ESCO2Q56NI9 601 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 FAM76BQ5HYJ3 339 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 RBM48Q5RL73 367 aaKnown RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 SFRP4Q6FHJ7 346 aaPredicted RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 C17orf107Q6ZR85 190 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 SSX6Q7RTT6 188 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 GALNT4Q8N4A0 578 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 OR51G2Q8NGK0 314 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 OR8S1Q8NH09 359 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 TAF15Q92804 592 aaKnown RBP eCLIP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 NEIL1Q96FI4 390 aaPredicted RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 WDR89Q96FK6 387 aaPredicted RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 HRASLS5Q96KN8 279 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 MNTQ99583 582 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 SLC29A1Q99808 456 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 APOL4Q9BPW4 351 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 ADI1Q9BV57 179 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 SSBP3Q9BWW4 388 aaPredicted RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 TLNRD1Q9H1K6 362 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 LIN7BQ9HAP6 207 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 C14orf119Q9NWQ9 140 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 CLN6Q9NWW5 311 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 WARS2Q9UGM6 360 aaKnown RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 NUFIP1Q9UHK0 495 aaKnown RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 MRM2Q9UI43 246 aaKnown RBP7.01□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF391Q9UJN7 358 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 INSIG2Q9Y5U4 225 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 MPC1Q9Y5U8 109 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 CSMD3Q7Z407 3707 aa7.01□□□□□ -1.29
SSBP3-212ENST00000528930 DOCK11Q5JSL3 2073 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 OOEPA6NGQ2 149 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF850A8MQ14 1090 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF670-ZNF695F2Z2N8 137 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 PHYHO14832 338 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 FCN3O75636 299 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 TTRP02766 147 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 OR2T7P0C7T2 308 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 CD40LGP29965 261 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 CD80P33681 288 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 KRTAP10-3P60369 221 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 CDC42P60953 191 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 GNB2P62879 340 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 CSNK2BP67870 215 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 EGR3Q06889 387 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 PRDX4Q13162 271 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 ZIK1Q3SY52 487 aaPredicted RBP7□□□□□ -1.29
SSBP3-212ENST00000528930 SLC25A30Q5SVS4 291 aa7□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF684Q5T5D7 378 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms