RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CSAG2Q9Y5P2 127 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 SPEGQ15772 3267 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 TNRC6AQ8NDV7 1962 aaKnown RBP12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 IGKV1-27A0A075B6S5 117 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 PQLC2LA1A4F0 135 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 ZNF850A8MQ14 1090 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 HMSDA8MTL9 139 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 F5H5P2 479 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 RRP8O43159 456 aaKnown RBP12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 RAD51DO75771 328 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 PMP2P02689 132 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 TPOP07202 933 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 TUBG1P23258 451 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 SNU13P55769 128 aaKnown RBP12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 TSPAN5P62079 268 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 FGL1Q08830 312 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 GUSBP1Q15486 140 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 MICBQ29980 383 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 Q5BKY6 102 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 RPUSD3Q6P087 351 aaKnown RBP12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 TFAP2EQ6VUC0 442 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 Q6ZT83 130 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 LYG2Q86SG7 212 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 MKXQ8IYA7 352 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 ZDHHC23Q8IYP9 409 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 UXS1Q8NBZ7 420 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 C1orf162Q8NEQ5 155 aaPredicted RBP12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 TMEM185AQ8NFB2 350 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 OR52B4Q8NGK2 314 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 OR6K3Q8NGY3 331 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 OR51F2Q8NH61 342 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 WBP1Q96G27 269 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 TRIB1Q96RU8 372 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 RHOFQ9HBH0 211 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 TUBG2Q9NRH3 451 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 STARD10Q9Y365 291 aa12.76□□□□□ -0.37
ECHDC1-220ENST00000528402 FRYLO94915 3013 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 EP300Q09472 2414 aaPredicted RBP12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 ANKRD30BLA7E2S9 258 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 CSN2P05814 226 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 GABRR1P24046 479 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 ZBTB25P24278 435 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 CD34P28906 385 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 PMP22Q01453 160 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 SRSF4Q08170 494 aaKnown RBP12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 PRDX4Q13162 271 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 EIF2S3LQ2VIR3 472 aaKnown RBP12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 CHRFAM7AQ494W8 412 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 ELP2Q6IA86 826 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 UNQ6126/PRO20091Q6UXV3 157 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 MED12LQ86YW9 2145 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 OR11H4Q8NGC9 324 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 OR56B2PQ8NGI1 322 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 EMG1Q92979 244 aaKnown RBP12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 PHB2Q99623 299 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 DHRS9Q9BPW9 319 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 ST6GALNAC5Q9BVH7 336 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 PAPOLGQ9BWT3 736 aaKnown RBP12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 PPA2Q9H2U2 334 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 GPR132Q9UNW8 380 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 VSIG4Q9Y279 399 aa12.75□□□□□ -0.37
ECHDC1-220ENST00000528402 A0A0B4J2A0 478 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 OR5B21A6NL26 309 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 FIGNL2A6NMB9 653 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 GOSR2O14653 212 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 SPRY1O43609 319 aaPredicted RBP12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 CRHP06850 196 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 FPR2P25090 351 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 IL13RA1P78552 427 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 DHRS2Q13268 280 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 RSPO4Q2I0M5 234 aaPredicted RBP12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 NHLRC3Q5JS37 347 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 C11orf88Q6PI97 169 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 OVCH2Q7RTZ1 564 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 LHFPL1Q86WI0 220 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 SLC30A7Q8NEW0 376 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 MITD1Q8WV92 249 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 ZNF75AQ96N20 296 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 CHIAQ9BZP6 476 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 CLEC4MQ9H2X3 399 aaPredicted RBP12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 PLK3Q9H4B4 646 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 OBP2BQ9NPH6 170 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 CA10Q9NS85 328 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 SHPKQ9UHJ6 478 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 OPN4Q9UHM6 478 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 DMDP11532 3685 aa12.74□□□□□ -0.37
ECHDC1-220ENST00000528402 PLSCR5A0PG75 271 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 C9orf170A2RU37 121 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 ZNF503-AS2A6NEH8 195 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 CD300LBA8K4G0 201 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 EFSO43281 561 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 ANGPTL7O43827 346 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 PDCD6O75340 191 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 DUS4LO95620 317 aaKnown RBP12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 HLA-AP01891 365 aaKnown RBP12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 CRYABP02511 175 aaKnown RBP12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 SELEP16581 610 aa12.73□□□□□ -0.37
ECHDC1-220ENST00000528402 FUT3P21217 361 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms