RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 C2orf74A8MZ97 194 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 C21orf140B9A014 251 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 C11orf98E9PRG8 122 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 FCN1O00602 326 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 TYROBPO43914 113 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 MPZL2O60487 215 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 SHOX2O60902 331 aaPredicted RBP4.32□□□□□ -1.72
PCF11-202ENST00000528336 GLSO94925 669 aaPredicted RBP4.32□□□□□ -1.72
PCF11-202ENST00000528336 APOEP02649 317 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 GNAO1P09471 354 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 ACSM4P0C7M7 580 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 ALDH3A1P30838 453 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 TLE4Q04727 773 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 PRKCDQ05655 676 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 SRSF6Q13247 344 aaKnown RBP4.32□□□□□ -1.72
PCF11-202ENST00000528336 OGFRL1Q5TC84 451 aaPredicted RBP4.32□□□□□ -1.72
PCF11-202ENST00000528336 METTL21CQ5VZV1 264 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 FAM45BPQ6NSW5 357 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 SMIM15Q7Z3B0 74 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 PIANPQ8IYJ0 282 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 CA13Q8N1Q1 262 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 SVOPLQ8N434 492 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 METTL13Q8N6R0 699 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 WDR31Q8NA23 367 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 OR2T33Q8NG76 320 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 OR5B3Q8NH48 314 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 OR2AE1Q8NHA4 323 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 PIGXQ8TBF5 258 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 ZNF502Q8TBZ5 544 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 BLOC1S5Q8TDH9 187 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 IFT81Q8WYA0 676 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 PPWD1Q96BP3 646 aaKnown RBP4.32□□□□□ -1.72
PCF11-202ENST00000528336 HSFY1Q96LI6 401 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 C6orf62Q9GZU0 229 aaPredicted RBP4.32□□□□□ -1.72
PCF11-202ENST00000528336 SLC22A4Q9H015 551 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 CTPS2Q9NRF8 586 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 SPANXB1Q9NS25 103 aaPredicted RBP4.32□□□□□ -1.72
PCF11-202ENST00000528336 DDX19AQ9NUU7 478 aaKnown RBP4.32□□□□□ -1.72
PCF11-202ENST00000528336 DOCK5Q9H7D0 1870 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 KIR2DS1A0A191URI9 304 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 A0A1B0GW55 424 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 GNG14A0A1W2PPG7 69 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 LYRM9A8MSI8 78 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 SYNGR1O43759 233 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 RAB36O95755 333 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 NUDT14O95848 222 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 ISG15P05161 165 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 DUX4L2P0CJ85 424 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 DUX4L3P0CJ86 424 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 DUX4L4P0CJ87 422 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 DUX4L5P0CJ88 424 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 DUX4L6P0CJ89 424 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 DUX4L7P0CJ90 424 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 LIMS3P0CW19 117 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 LIMS4P0CW20 117 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 CD36P16671 472 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 IGFBP5P24593 272 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 ARL2P36404 184 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 HCCSP53701 268 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 TMEM33P57088 247 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 SPCS3P61009 180 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 STXBP1P61764 594 aaKnown RBP4.31□□□□□ -1.72
PCF11-202ENST00000528336 RANP62826 216 aaKnown RBP4.31□□□□□ -1.72
PCF11-202ENST00000528336 KIR2DS1Q14954 304 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 PSMD5Q16401 504 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 CYP51A1Q16850 503 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 CHRFAM7AQ494W8 412 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 SAXO2Q658L1 398 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 MED27Q6P2C8 311 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 TRIM40Q6P9F5 258 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 CD200R1LQ6Q8B3 271 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 DUX4L9Q6RFH8 374 aaPredicted RBP4.31□□□□□ -1.72
PCF11-202ENST00000528336 CCDC121Q6ZUS5 278 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 TRAPPC5Q8IUR0 188 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 BBS7Q8IWZ6 715 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 FAM45AQ8TCE6 357 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 SFXN5Q8TD22 340 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 NEK7Q8TDX7 302 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 ADAMTS16Q8TE57 1224 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 FAM172AQ8WUF8 416 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 NELFBQ8WX92 580 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 SMIM19Q96E16 107 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 SEC22AQ96IW7 307 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 ADTRPQ96IZ2 230 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 TEAD3Q99594 435 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 TSNAXQ99598 290 aaKnown RBP4.31□□□□□ -1.72
PCF11-202ENST00000528336 FOXC2Q99958 501 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 NIPSNAP1Q9BPW8 284 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 TIPINQ9BVW5 301 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 CALN1Q9BXU9 219 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 MRPS26Q9BYN8 205 aaKnown RBP4.31□□□□□ -1.72
PCF11-202ENST00000528336 RDH14Q9HBH5 336 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 XPNPEP1Q9NQW7 623 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 TNFRSF19Q9NS68 423 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 EXD2Q9NVH0 621 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 DUX4Q9UBX2 424 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 RANBP2P49792 3224 aaKnown RBP4.31□□□□□ -1.72
PCF11-202ENST00000528336 ATRXP46100 2492 aa4.31□□□□□ -1.72
PCF11-202ENST00000528336 GCGP01275 180 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms