RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ELL3Q9HB65 397 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-214ENST00000528165 CHST11Q9NPF2 352 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 PHF3Q92576 2039 aaKnown RBP12.87□□□□□ -0.35
CAPN1-214ENST00000528165 NPIPB13A6NJU9 1138 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF726A6NNF4 738 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 FOXI3A8MTJ6 420 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-214ENST00000528165 NPIPB4C9JG80 1138 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 RRP8O43159 456 aaKnown RBP12.87□□□□□ -0.35
CAPN1-214ENST00000528165 CYB5BO43169 146 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 SOD3P08294 240 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 C1orf61Q13536 156 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 IL13RA2Q14627 380 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 ABCA11PQ4W5N1 156 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 GFI1BQ5VTD9 330 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 RTL6Q6ICC9 239 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 FBXW12Q6X9E4 464 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 DOK3Q7L591 496 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 HIST3H2BBQ8N257 126 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF319Q9P2F9 582 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 ZDHHC8Q9ULC8 765 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 LHFPL6Q9Y693 200 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 ARGFXA6NJG6 315 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 SLC31A2O15432 143 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 OR5AC1P0C628 307 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 CD81P60033 236 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 DLK1P80370 383 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 KHDC3LQ587J8 217 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 LYZL2Q7Z4W2 148 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF296Q8WUU4 475 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-214ENST00000528165 NUDT22Q9BRQ3 303 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 CFHR5Q9BXR6 569 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 FBRSQ9HAH7 460 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 SOHLH2Q9NX45 425 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 MCTS1Q9ULC4 181 aaKnown RBP12.86□□□□□ -0.35
CAPN1-214ENST00000528165 MMACHCQ9Y4U1 282 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 A0A087X0M5 115 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 TGIF2-C20orf24A0A0A6YYL0 155 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 A0A1B0GX30 115 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 B4DGG1 531 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 STMND1H3BQB6 276 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 ST8SIA3O43173 380 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 KLF8O95600 359 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-214ENST00000528165 OR5H8P0DN80 308 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 KLK2P20151 261 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 RGS19P49795 217 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 ERVFRD-1P60508 538 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 CCL20P78556 96 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 PPA1Q15181 289 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF124Q15973 351 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 DNLZQ5SXM8 178 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 HIST2H3PS2Q5TEC6 136 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 FAM57BQ71RH2 274 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 C6orf201Q7Z4U5 140 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 WWTR1Q9GZV5 400 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 NAA60Q9H7X0 242 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 IL23AQ9NPF7 189 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 RCL1Q9Y2P8 373 aaKnown RBP12.86□□□□□ -0.35
CAPN1-214ENST00000528165 KNL1Q8NG31 2342 aa12.86□□□□□ -0.35
CAPN1-214ENST00000528165 OR5H15A6NDH6 313 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 OR5H1A6NKK0 313 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 H0YL77 283 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 IFNA10P01566 189 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 TRGC2P03986 189 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 TMEM225BP0DP42 221 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 CTSEP14091 401 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 DUSP1P28562 367 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 TFF2Q03403 129 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 TMEM187Q14656 261 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF429Q86V71 674 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 OR2G3Q8NGZ4 309 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 SSC4DQ8WTU2 575 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 RTN4IP1Q8WWV3 396 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-214ENST00000528165 PLEKHJ1Q9NW61 149 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 RPL36A-HNRNPH2H7BZ11 118 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 HSD17B6O14756 317 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 FABP4P15090 132 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 OR1D4P47884 311 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 ASCL1P50553 236 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 TAS2R60P59551 318 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 RND3P61587 244 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 GABREP78334 506 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 HAGHQ16775 308 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 OR2T2Q6IF00 324 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 OGFOD3Q6PK18 319 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 SLC22A18ASQ8N1D0 253 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF283Q8N7M2 679 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 ZFP62Q8NB50 900 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-214ENST00000528165 REEP6Q96HR9 211 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF700Q9H0M5 742 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 PRO1933Q9H354 126 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 C8orf33Q9H7E9 229 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-214ENST00000528165 SIRT7Q9NRC8 400 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 DECR2Q9NUI1 292 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 C2orf16Q68DN1 1984 aa12.85□□□□□ -0.35
CAPN1-214ENST00000528165 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-214ENST00000528165 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-214ENST00000528165 BTBD17A6NE02 478 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 CA11O75493 328 aa12.84□□□□□ -0.35
CAPN1-214ENST00000528165 PTBP3O95758 552 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms