RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 TMEM42Q69YG0 159 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 ANGPTL5Q86XS5 388 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 CMTM4Q8IZR5 234 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 RDH10Q8IZV5 341 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 PQLC1Q8N2U9 271 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 PRSS35Q8N3Z0 413 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 POC1AQ8NBT0 407 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 TAF15Q92804 592 aaKnown RBP eCLIP12.81□□□□□ -0.36
CAPN1-213ENST00000527897 STMN2Q93045 179 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 SLC29A1Q99808 456 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 ZMAT3Q9HA38 289 aaKnown RBP12.81□□□□□ -0.36
CAPN1-213ENST00000527897 OR14J1Q9UGF5 321 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 POLDIP2Q9Y2S7 368 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 KPTNQ9Y664 436 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 IGHV1-69DA0A0B4J2H0 117 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 LOC107986453A0A1B0GWG9 222 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 A0A1W2PRD5 423 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 A0A1W2PRF3 423 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 A0A1W2PRM7 423 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 RFPL4AA6NLU0 287 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 SNTNA6NMZ2 147 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 RFPL4AL1F8VTS6 287 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 J3QLW9 94 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 GPR37O15354 613 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 IGHV1-69P01742 117 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 RNASE1P07998 156 aaKnown RBP12.8□□□□□ -0.36
CAPN1-213ENST00000527897 ZNF19P17023 458 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 CCL1P22362 96 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 KIR3DL2P43630 455 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 CEBPDP49716 269 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-213ENST00000527897 BPIFB3P59826 476 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 OCLNQ16625 522 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 TUSC1Q2TAM9 212 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 SMIM21Q3B7S5 101 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 C11orf91Q3C1V1 193 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 AWAT1Q58HT5 328 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 ACP7Q6ZNF0 438 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 ENTHD1Q8IYW4 607 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 LY6G5BQ8NDX9 201 aa12.8□□□□□ -0.36
CAPN1-213ENST00000527897 DHRS7CA6NNS2 312 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 SERPINA3P01011 423 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 HTR1AP08908 422 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 UBCP0CG48 685 aaKnown RBP12.79□□□□□ -0.36
CAPN1-213ENST00000527897 PGA5P0DJD9 388 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 HKR1P10072 659 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 COMPP49747 757 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-213ENST00000527897 OR12D2P58182 307 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 ZNF91Q05481 1191 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 KLRD1Q13241 179 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 UBE2V2Q15819 145 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 SLC25A30Q5SVS4 291 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 CALHM1Q8IU99 346 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 FAM185AQ8N0U4 392 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 OR2G2Q8NGZ5 317 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 AMBNQ9NP70 447 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 RASL12Q9NYN1 266 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 MAB21L2Q9Y586 359 aa12.79□□□□□ -0.36
CAPN1-213ENST00000527897 A0A0U1RQK1 487 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 LOC100130705A0A1B0GUX0 176 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 SLC1A7O00341 560 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 SLC16A6O15403 523 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 GATBO75879 557 aaKnown RBP12.78□□□□□ -0.36
CAPN1-213ENST00000527897 ZNF20P17024 532 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 PRDX2P32119 198 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 CAV3P56539 151 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 FOXL1Q12952 345 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 LHFPL3Q86UP9 236 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 ACBD7Q8N6N7 88 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 LGALS12Q96DT0 336 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 MRPL48Q96GC5 212 aaKnown RBP12.78□□□□□ -0.36
CAPN1-213ENST00000527897 C4orf36Q96KX1 117 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 Q96MT0 163 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 ZNF222Q9UK12 451 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 FAM96BQ9Y3D0 163 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 PCDHGB1Q9Y5G3 927 aa12.78□□□□□ -0.36
CAPN1-213ENST00000527897 E9PQ18 207 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 MPZL2O60487 215 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 MELTFP08582 738 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 OCM2P0CE71 109 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 OCMP0CE72 109 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-213ENST00000527897 DBTP11182 482 aaKnown RBP12.77□□□□□ -0.37
CAPN1-213ENST00000527897 OMGP23515 440 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 NANOS3P60323 173 aaKnown RBP12.77□□□□□ -0.37
CAPN1-213ENST00000527897 ISL1P61371 349 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 ACTA2P62736 377 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 ACTG2P63267 376 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 BLMHQ13867 455 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 TMEM244Q5VVB8 128 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 C16orf87Q6PH81 154 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 Q6YL49 198 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 Q6ZSR3 168 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 KCTD20Q7Z5Y7 419 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 CD177Q8N6Q3 437 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 KIR3DL3Q8N743 410 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 CCDC54Q8NEL0 328 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 SLAMF9Q96A28 289 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 FGGYQ96C11 551 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 BORCS8Q96FH0 119 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 NRIP2Q9BQI9 281 aa12.77□□□□□ -0.37
CAPN1-213ENST00000527897 ALG8Q9BVK2 526 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms