RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 ZNF726A6NNF4 738 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 H3BSH0 61 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 K7EQM0 130 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 SLC22A1O15245 554 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 AKAP8O43823 692 aaKnown RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 AQP8O94778 261 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ZNF432O94892 652 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 VAMP5O95183 116 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 SYNGR4O95473 234 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 FABP1P07148 127 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 OR2T7P0C7T2 308 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ZNF823P16415 610 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ZNF708P17019 499 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 NDUFB7P17568 137 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 EDNRAP25101 427 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 CRABP1P29762 137 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 MAGEB1P43366 347 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 CSNK1A1P48729 337 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ACTA2P62736 377 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ACTG2P63267 376 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 FABP5Q01469 135 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 MXD1Q05195 221 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 SLAQ13239 276 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 TPBGQ13641 420 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 EIF2B1Q14232 305 aaKnown RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 ICAM4Q14773 271 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 SLC17A1Q14916 467 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ZNF169Q14929 603 aaPredicted RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 CDK5R1Q15078 307 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ODF4Q2M2E3 257 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ANXA2RQ3ZCQ2 193 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 HIKESHIQ53FT3 197 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 YIF1BQ5BJH7 314 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 BEX5Q5H9J7 111 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ZNF684Q5T5D7 378 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 TMEM268Q5VZI3 342 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 C22orf42Q6IC83 251 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 DNM1P34Q6PK57 102 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 SLC25A47Q6Q0C1 308 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 LRRN1Q6UXK5 716 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 RBPMS2Q6ZRY4 209 aaKnown RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 ASB18Q6ZVZ8 466 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 HDDC2Q7Z4H3 204 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 LUZP2Q86TE4 346 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 CCDC36Q8IYA8 594 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 SYS1Q8N2H4 156 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ZADH2Q8N4Q0 377 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 RBMXL3Q8N7X1 1067 aaKnown RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 SLC26A10Q8NG04 563 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 OR6Q1Q8NGQ2 317 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 OR2T27Q8NH04 317 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 OR6X1Q8NH79 312 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 OTOSQ8NHW6 89 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 NEIL3Q8TAT5 605 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 FNDC9Q8TBE3 224 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 DYNC2LI1Q8TCX1 351 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 NEU4Q8WWR8 484 aaPredicted RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 C11orf40Q8WZ69 217 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 HSD17B8Q92506 261 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 EXTL1Q92935 676 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 TMEM54Q969K7 222 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 MCHR2Q969V1 340 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 CPNE4Q96A23 557 aaPredicted RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 RFT1Q96AA3 541 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 HAVCR1Q96D42 359 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 PELI1Q96FA3 418 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 MRPL48Q96GC5 212 aaKnown RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 ZNF479Q96JC4 524 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ZNF48Q96MX3 618 aaPredicted RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 RBP7Q96R05 134 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 TAAR6Q96RI8 345 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 CITED1Q99966 193 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 PDCD1LG2Q9BQ51 273 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ABHD6Q9BV23 337 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 C1QTNF5Q9BXJ0 243 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ZDHHC11Q9H8X9 412 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 SP140LQ9H930 580 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 CALHM2Q9HA72 323 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ISYNA1Q9NPH2 558 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 TIGARQ9NQ88 270 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 ZNF275Q9NSD4 429 aaPredicted RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 C19orf12Q9NSK7 152 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 AURKAIP1Q9NWT8 199 aaPredicted RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 BABAM2Q9NXR7 383 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 SLCO1C1Q9NYB5 712 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 GLTPQ9NZD2 209 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 MRM2Q9UI43 246 aaKnown RBP3.62□□□□□ -1.83
CD44-226ENST00000527889 ST6GALNAC2Q9UJ37 374 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 SSR3Q9UNL2 185 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 PLEKHA6Q9Y2H5 1048 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 POLR1DQ9Y2S0 133 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 CMAHPQ9Y471 501 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 MAB21L2Q9Y586 359 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 PUS1Q9Y606 427 aaKnown RBP eCLIP3.62□□□□□ -1.83
CD44-226ENST00000527889 ADGRG4Q8IZF6 3080 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 OTOGQ6ZRI0 2925 aa3.62□□□□□ -1.83
CD44-226ENST00000527889 DCHS2Q6V1P9 2916 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ARHGAP32A7KAX9 2087 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 CENPEQ02224 2701 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 MED13LQ71F56 2210 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms