RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 GALMQ96C23 342 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 PBDC1Q9BVG4 233 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 KIF25Q9UIL4 384 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 ZNF724A8MTY0 619 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 SKA3Q8IX90 412 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 CD300LFQ8TDQ1 290 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 LRRC29Q8WV35 223 aa13.22□□□□□ -0.29
USP47-207ENST00000527733 TSPAN15O95858 294 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 MT-CO2P00403 227 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 KIR3DL2P43630 455 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 BTLAQ7Z6A9 289 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 ZNF441Q8N8Z8 693 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 ST7LQ8TDW4 575 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 AMELYQ99218 206 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 TIMP4Q99727 224 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 PTDSS2Q9BVG9 487 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 GON7Q9BXV9 100 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 NMNAT2Q9BZQ4 307 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 CHST5Q9GZS9 411 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 MRPL22Q9NWU5 206 aaKnown RBP13.21□□□□□ -0.29
USP47-207ENST00000527733 TRGV10A0A0A0MS01 117 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 CDK2AP1O14519 115 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 TNFSF10P50591 281 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 ELP2Q6IA86 826 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 MOB1BQ7L9L4 216 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 C6orf201Q7Z4U5 140 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 ZNF808Q8N4W9 903 aaPredicted RBP13.21□□□□□ -0.29
USP47-207ENST00000527733 MSI2Q96DH6 328 aaKnown RBP13.21□□□□□ -0.29
USP47-207ENST00000527733 OSGIN2Q9Y236 505 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 A0A1B0GUH1 482 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 NDUFB3O43676 98 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 GMDSO60547 372 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 CLDN1O95832 211 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 NGFP01138 241 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 ZNF92Q03936 586 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 PLA2G7Q13093 441 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 OR52W1Q6IF63 320 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 FAM122BQ7Z309 247 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 GPX8Q8TED1 209 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 ABHD1Q96SE0 405 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 SULT4A1Q9BR01 284 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 FAAP24Q9BTP7 215 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 TINAGL1Q9GZM7 467 aaPredicted RBP13.21□□□□□ -0.29
USP47-207ENST00000527733 PPP1R3CQ9UQK1 317 aa13.21□□□□□ -0.29
USP47-207ENST00000527733 A0A0U1RQV5 110 aa13.21□□□□□ -0.3
USP47-207ENST00000527733 ZIC3O60481 467 aa13.21□□□□□ -0.3
USP47-207ENST00000527733 OR4E1P0C645 316 aa13.21□□□□□ -0.3
USP47-207ENST00000527733 LINC00303Q3SY05 128 aa13.21□□□□□ -0.3
USP47-207ENST00000527733 FADS6Q8N9I5 356 aa13.21□□□□□ -0.3
USP47-207ENST00000527733 SLC25A40Q8TBP6 338 aa13.21□□□□□ -0.3
USP47-207ENST00000527733 RTN4IP1Q8WWV3 396 aaPredicted RBP13.21□□□□□ -0.3
USP47-207ENST00000527733 A0A1B0GV50 99 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 SNRPGP15A8MWD9 76 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 IGHMP01871 453 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 OMGP23515 440 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 BAMBIQ13145 260 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 HFEQ30201 348 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 LRRC10Q5BKY1 277 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 LINC01590Q5TEZ4 76 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 LINC00114Q6XXX2 140 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 ARL11Q969Q4 196 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 FAM122AQ96E09 287 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 TINAGQ9UJW2 476 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 NBASA2RRP1 2371 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 CCSO14618 274 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 S100A6P06703 90 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 NAA40Q86UY6 237 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 SUMF1Q8NBK3 374 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 VOPP1Q96AW1 172 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 ADAT3Q96EY9 351 aaPredicted RBP13.2□□□□□ -0.3
USP47-207ENST00000527733 MESP1Q9BRJ9 268 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 MYOZ1Q9NP98 299 aaPredicted RBP13.2□□□□□ -0.3
USP47-207ENST00000527733 PRSS50Q9UI38 385 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 ST8SIA3O43173 380 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 IFNA10P01566 189 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 HBG1P69891 147 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 HBG2P69892 147 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 OR10X1Q8NGY0 326 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 POC1BQ8TC44 478 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 CCL17Q92583 94 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 HEYLQ9NQ87 328 aaPredicted RBP13.2□□□□□ -0.3
USP47-207ENST00000527733 AKR7A2O43488 359 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 ADAM11O75078 769 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 GIPP09681 153 aaPredicted RBP13.2□□□□□ -0.3
USP47-207ENST00000527733 HOXB1P14653 301 aaPredicted RBP13.2□□□□□ -0.3
USP47-207ENST00000527733 H2BFWTQ7Z2G1 175 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 OR5A2Q8NGI9 324 aa13.2□□□□□ -0.3
USP47-207ENST00000527733 PNPP00491 289 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 BLOC1S1P78537 153 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 OPCMLQ14982 345 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 OPN3Q9H1Y3 402 aaPredicted RBP13.19□□□□□ -0.3
USP47-207ENST00000527733 LHFPL6Q9Y693 200 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 HOXA1P49639 335 aaPredicted RBP13.19□□□□□ -0.3
USP47-207ENST00000527733 PIGPP57054 158 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 HES1Q14469 280 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 POU4F3Q15319 338 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 NCCRP1Q6ZVX7 275 aaPredicted RBP13.19□□□□□ -0.3
USP47-207ENST00000527733 TUBAL3A6NHL2 446 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 CELA3AP09093 270 aa13.19□□□□□ -0.3
USP47-207ENST00000527733 CTSSP25774 331 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms