RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 GPR148Q8TDV2 347 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 PDCD1LG2Q9BQ51 273 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 MRPS26Q9BYN8 205 aaKnown RBP8.48□□□□□ -1.05
VPS28-204ENST00000526054 TLNRD1Q9H1K6 362 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 C7orf69Q9H7B7 122 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 NEK6Q9HC98 313 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 PAK1IP1Q9NWT1 392 aaPredicted RBP8.48□□□□□ -1.05
VPS28-204ENST00000526054 PPIAL4AQ9Y536 164 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 CMYA5Q8N3K9 4069 aa8.48□□□□□ -1.05
VPS28-204ENST00000526054 CDIPTO14735 213 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 FSTL3O95633 263 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 LALBAP00709 142 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 MT-ND2P03891 347 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 SMIM18P0DKX4 95 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 PRKACBP22694 351 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 IRF3Q14653 427 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 ZMYND11Q15326 602 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 SPHARQ15513 63 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 MED22Q15528 200 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 KCNJ8Q15842 424 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 YIF1BQ5BJH7 314 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 FAM76BQ5HYJ3 339 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 DMKNQ6E0U4 476 aaPredicted RBP8.47□□□□□ -1.05
VPS28-204ENST00000526054 WDR82Q6UXN9 313 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 ZNF826PQ6ZT77 177 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 UTS2BQ765I0 119 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 LRRC28Q86X40 367 aaPredicted RBP8.47□□□□□ -1.05
VPS28-204ENST00000526054 ZNF573Q86YE8 665 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 ZFP41Q8N8Y5 198 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 BOLLQ8N9W6 283 aaKnown RBP8.47□□□□□ -1.05
VPS28-204ENST00000526054 SCCPDHQ8NBX0 429 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 OR51A4Q8NGJ6 313 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 OR10Z1Q8NGY1 313 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 SGMS2Q8NHU3 365 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 TRMT10AQ8TBZ6 339 aaKnown RBP8.47□□□□□ -1.05
VPS28-204ENST00000526054 LRRC29Q8WV35 223 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 C22orf15Q8WYQ4 148 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 SGCDQ92629 289 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 RPL3LQ92901 407 aaKnown RBP8.47□□□□□ -1.05
VPS28-204ENST00000526054 FGGYQ96C11 551 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 ADAT3Q96EY9 351 aaPredicted RBP8.47□□□□□ -1.05
VPS28-204ENST00000526054 BORCS8Q96FH0 119 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 FGF23Q9GZV9 251 aaPredicted RBP8.47□□□□□ -1.05
VPS28-204ENST00000526054 OR51I2Q9H344 312 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 VCX3AQ9NNX9 186 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 ESM1Q9NQ30 184 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 ZNF281Q9Y2X9 895 aa8.47□□□□□ -1.05
VPS28-204ENST00000526054 ARHGAP32A7KAX9 2087 aa8.46□□□□□ -1.05
VPS28-204ENST00000526054 DOCK11Q5JSL3 2073 aa8.46□□□□□ -1.05
VPS28-204ENST00000526054 TRAV38-1A0A0B4J264 116 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 PNMA8CA0A1B0GUJ8 204 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 FAM230AA0A1W2PPH8 454 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 PQLC2LA1A4F0 135 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 OOEPA6NGQ2 149 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 J3QT63 122 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 LGALS8O00214 317 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 FOXH1O75593 365 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 FSHBP01225 129 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 CD1AP06126 327 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 ATF1P18846 271 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 CPT2P23786 658 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 FPR2P25090 351 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 AZGP1P25311 298 aaKnown RBP8.46□□□□□ -1.06
VPS28-204ENST00000526054 CD80P33681 288 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 CFHR2P36980 270 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 HAAOP46952 286 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 FUT6P51993 359 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 UBA52P62987 128 aaKnown RBP8.46□□□□□ -1.06
VPS28-204ENST00000526054 ACSM1Q08AH1 577 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 HNRNPA0Q13151 305 aaKnown RBP8.46□□□□□ -1.06
VPS28-204ENST00000526054 TBCEQ15813 527 aaPredicted RBP8.46□□□□□ -1.06
VPS28-204ENST00000526054 UBE2V2Q15819 145 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 ZNF404Q494X3 552 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 AWAT1Q58HT5 328 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 ARMCX4Q5H9R4 360 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 DMRTC1Q5HYR2 192 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 HAGHLQ6PII5 290 aaPredicted RBP8.46□□□□□ -1.06
VPS28-204ENST00000526054 RBMS3Q6XE24 437 aaKnown RBP8.46□□□□□ -1.06
VPS28-204ENST00000526054 SERPINA12Q8IW75 414 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 C11orf53Q8IXP5 236 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 SVOPQ8N4V2 548 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 GCSAMQ8N6F7 178 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 ZDHHC22Q8N966 263 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 DNAAF1Q8NEP3 725 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 OR13C9Q8NGT0 318 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 ZNF671Q8TAW3 534 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 NPRL2Q8WTW4 380 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 RGP1Q92546 391 aaPredicted RBP8.46□□□□□ -1.06
VPS28-204ENST00000526054 THRSPQ92748 146 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 GHSRQ92847 366 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 SPSB1Q96BD6 273 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 PGLYRP3Q96LB9 341 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 ZCCHC4Q9H5U6 513 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 OPN4Q9UHM6 478 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 POLDIP2Q9Y2S7 368 aa8.46□□□□□ -1.06
VPS28-204ENST00000526054 LSM2Q9Y333 95 aaKnown RBP8.46□□□□□ -1.06
VPS28-204ENST00000526054 SIRT4Q9Y6E7 314 aaPredicted RBP8.46□□□□□ -1.06
VPS28-204ENST00000526054 PPIAL4CA0A0B4J2A2 164 aa8.45□□□□□ -1.06
VPS28-204ENST00000526054 TRIM64CA6NLI5 447 aa8.45□□□□□ -1.06
VPS28-204ENST00000526054 CEACAM18A8MTB9 384 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms