RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 RNF170Q96K19 258 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 GAFA1Q96PS6 74 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 MNTQ99583 582 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 ZNF184Q99676 751 aaPredicted RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 PAPOLGQ9BWT3 736 aaKnown RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 MED20Q9H944 212 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 AURKAIP1Q9NWT8 199 aaPredicted RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 HAO2Q9NYQ3 351 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 KAAG1Q9UBP8 84 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 SLC25A10Q9UBX3 287 aaPredicted RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 WARS2Q9UGM6 360 aaKnown RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.36□□□□□ -1.55
CD44-221ENST00000526000 SF3B6Q9Y3B4 125 aaKnown RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 PRKDCP78527 4128 aaKnown RBP5.35□□□□□ -1.55
CD44-221ENST00000526000 IRGMA1A4Y4 181 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 CHST1O43916 411 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 RHBDL1O75783 438 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 IGLL1P15814 213 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 JUNBP17275 347 aaPredicted RBP5.35□□□□□ -1.55
CD44-221ENST00000526000 SPI1P17947 270 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 HSD11B1P28845 292 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 EPHA2P29317 976 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 HTR1FP30939 366 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 KIR2DS4P43632 304 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 ENTPD1P49961 510 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 UBE2E1P51965 193 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 ZNF121P58317 390 aaPredicted RBP5.35□□□□□ -1.55
CD44-221ENST00000526000 CXCR4P61073 352 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 PRDX4Q13162 271 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 BLMHQ13867 455 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 ZIK1Q3SY52 487 aaPredicted RBP5.35□□□□□ -1.55
CD44-221ENST00000526000 KLHL12Q53G59 568 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 ARSJQ5FYB0 599 aaPredicted RBP5.35□□□□□ -1.55
CD44-221ENST00000526000 TEX30Q5JUR7 227 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 AADACL4Q5VUY2 407 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 ZNF691Q5VV52 312 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 HCP5Q6MZN7 132 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 C11orf87Q6NUJ2 197 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 IZUMO2Q6UXV1 221 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 Q6ZS46 218 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 MEPCEQ7L2J0 689 aaKnown RBP5.35□□□□□ -1.55
CD44-221ENST00000526000 THAP5Q7Z6K1 395 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 LHFPL4Q7Z7J7 247 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 TMEM219Q86XT9 240 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 CPOQ8IVL8 374 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 TIGD4Q8IY51 512 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 IQCF1Q8N6M8 205 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 TCEANCQ8N8B7 351 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 ZNF454Q8N9F8 522 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 BEND2Q8NDZ0 799 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 OR4M1Q8NGD0 313 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 OR4C13Q8NGP0 309 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 OR6K6Q8NGW6 343 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 OR5R1Q8NH85 324 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 OR2T6Q8NHC8 308 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 NPRL2Q8WTW4 380 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 NRG4Q8WWG1 115 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 CYGBQ8WWM9 190 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 MRPL48Q96GC5 212 aaKnown RBP5.35□□□□□ -1.55
CD44-221ENST00000526000 AJUBAQ96IF1 538 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 IL4I1Q96RQ9 567 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 MBOAT4Q96T53 435 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 AMELYQ99218 206 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 CITED2Q99967 270 aaPredicted RBP5.35□□□□□ -1.55
CD44-221ENST00000526000 MICU1Q9BPX6 476 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 ANKRD60Q9BZ19 345 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 FGF23Q9GZV9 251 aaPredicted RBP5.35□□□□□ -1.55
CD44-221ENST00000526000 CLN6Q9NWW5 311 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 TMEM14AQ9Y6G1 99 aa5.35□□□□□ -1.55
CD44-221ENST00000526000 TRBV23-1A0A0A0MS06 115 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 NKX6-3A6NJ46 265 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 FAM183AA6NL82 134 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 ANXA2P2A6NMY6 339 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 OR2AT4A6NND4 320 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 XRCC2O43543 280 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 PRKYO43930 277 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 PEX14O75381 377 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 FBXO24O75426 580 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 INMTO95050 263 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 ACAA1P09110 424 aaPredicted RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 PIPP12273 146 aaPredicted RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 GABRB1P18505 474 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 SLC2A5P22732 501 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 MYF6P23409 242 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 GLRA1P23415 457 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 GSTT1P30711 240 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 OTX1P32242 354 aaPredicted RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 POLR2IP36954 125 aaKnown RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 DDOSTP39656 456 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 CEBPDP49716 269 aaPredicted RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 GPM6AP51674 278 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 HCCSP53701 268 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 AQP4P55087 323 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 LGALS4P56470 323 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 LRRC75BQ2VPJ9 315 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 TMEM95Q3KNT9 176 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 CEP78Q5JTW2 689 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 VAX1Q5SQQ9 334 aa5.34□□□□□ -1.55
CD44-221ENST00000526000 KPRPQ5T749 579 aaPredicted RBP5.34□□□□□ -1.55
CD44-221ENST00000526000 LINC01590Q5TEZ4 76 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms