RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 FOXD3Q9UJU5 478 aaPredicted RBP15.11■□□□□ 0.01
BEST1-203ENST00000524877 SPAG17Q6Q759 2223 aa15.11■□□□□ 0.01
BEST1-203ENST00000524877 HIKESHIQ53FT3 197 aa15.11■□□□□ 0.01
BEST1-203ENST00000524877 H2BFWTQ7Z2G1 175 aa15.11■□□□□ 0.01
BEST1-203ENST00000524877 MSRB3Q8IXL7 192 aa15.11■□□□□ 0.01
BEST1-203ENST00000524877 OR2G2Q8NGZ5 317 aa15.11■□□□□ 0.01
BEST1-203ENST00000524877 ST3GAL6Q9Y274 331 aa15.11■□□□□ 0.01
BEST1-203ENST00000524877 RPL29P47914 159 aaKnown RBP15.1■□□□□ 0.01
BEST1-203ENST00000524877 RTP5Q14D33 572 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 ZBTB37Q5TC79 503 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 SLC38A9Q8NBW4 561 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 EDARADDQ8WWZ3 215 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 MOGAT1Q96PD6 335 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 AKR1C1Q04828 323 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 CDK5R1Q15078 307 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 UNQ6494/PRO21346Q6UXR6 183 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 MOB3BQ86TA1 216 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 C1orf174Q8IYL3 243 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 UCN2Q96RP3 112 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 GAL3ST2Q9H3Q3 398 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 ISYNA1Q9NPH2 558 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 SPRY1O43609 319 aaPredicted RBP15.1■□□□□ 0.01
BEST1-203ENST00000524877 DHRS3O75911 302 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 ZNF26P17031 533 aaPredicted RBP15.1■□□□□ 0.01
BEST1-203ENST00000524877 PTBP1P26599 531 aaKnown RBP eCLIP15.1■□□□□ 0.01
BEST1-203ENST00000524877 ADPRHL1Q8NDY3 354 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 ZNF75AQ96N20 296 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 SPSB2Q99619 263 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 PLA2G12AQ9BZM1 189 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 FBXO7Q9Y3I1 522 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 TSPAN2O60636 221 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 ASCL5Q7RTU5 278 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 MRGPRGQ86SM5 289 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 OR2D3Q8NGH3 330 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 UBE2FQ969M7 185 aa15.1■□□□□ 0.01
BEST1-203ENST00000524877 TINAGL1Q9GZM7 467 aaPredicted RBP15.1■□□□□ 0.01
BEST1-203ENST00000524877 A0A0B4J2A0 478 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 PHF1O43189 567 aaPredicted RBP15.09■□□□□ 0.01
BEST1-203ENST00000524877 HLA-AP01891 365 aaKnown RBP15.09■□□□□ 0.01
BEST1-203ENST00000524877 LSM6P62312 80 aaKnown RBP15.09■□□□□ 0.01
BEST1-203ENST00000524877 TSEN54Q7Z6J9 526 aaKnown RBP15.09■□□□□ 0.01
BEST1-203ENST00000524877 SHPKQ9UHJ6 478 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 TRAF3IP2O43734 574 aaPredicted RBP15.09■□□□□ 0.01
BEST1-203ENST00000524877 FABP4P15090 132 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 MOGAT2Q3SYC2 334 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 NHLRC1Q6VVB1 395 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 VAMP8Q9BV40 100 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 SLC23A1Q9UHI7 598 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 FOXJ3Q9UPW0 622 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 MPC1Q9Y5U8 109 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 EPPINO95925 133 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 HOXB5P09067 269 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 MGST1P10620 155 aaKnown RBP15.09■□□□□ 0.01
BEST1-203ENST00000524877 CTU2Q2VPK5 515 aaKnown RBP15.09■□□□□ 0.01
BEST1-203ENST00000524877 CLLU1Q5K131 121 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 PLSCR3Q9NRY6 295 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 KLK13Q9UKR3 277 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 C17orf112F2Z3M2 114 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 ST8SIA5O15466 376 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 TRAT1Q6PIZ9 186 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 DEGS2Q6QHC5 323 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 CATSPERDQ86XM0 798 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 SDSLQ96GA7 329 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 PPP5D1E7EU14 171 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 WISP3O95389 354 aaPredicted RBP15.09■□□□□ 0.01
BEST1-203ENST00000524877 RBMS2Q15434 407 aaKnown RBP15.09■□□□□ 0.01
BEST1-203ENST00000524877 SLC25A35Q3KQZ1 300 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 SPNS3Q6ZMD2 512 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 GALMQ96C23 342 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 TRAF4Q9BUZ4 470 aaPredicted RBP15.09■□□□□ 0.01
BEST1-203ENST00000524877 SERTAD4Q9NUC0 356 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 ZNF586Q9NXT0 402 aa15.09■□□□□ 0.01
BEST1-203ENST00000524877 PATE4P0C8F1 98 aa15.08■□□□□ 0.01
BEST1-203ENST00000524877 Q5PR19 223 aa15.08■□□□□ 0.01
BEST1-203ENST00000524877 KDF1Q8NAX2 398 aaPredicted RBP15.08■□□□□ 0.01
BEST1-203ENST00000524877 FGF20Q9NP95 211 aaPredicted RBP15.08■□□□□ 0.01
BEST1-203ENST00000524877 A0A0B4J203 849 aa15.08■□□□□ 0
BEST1-203ENST00000524877 TMEM82A0PJX8 343 aa15.08■□□□□ 0
BEST1-203ENST00000524877 TMEM8BA6NDV4 472 aa15.08■□□□□ 0
BEST1-203ENST00000524877 PRRX1P54821 245 aa15.08■□□□□ 0
BEST1-203ENST00000524877 PCBP3P57721 371 aaKnown RBP15.08■□□□□ 0
BEST1-203ENST00000524877 SPACA5Q96QH8 159 aa15.08■□□□□ 0
BEST1-203ENST00000524877 SMIM3Q9BZL3 60 aa15.08■□□□□ 0
BEST1-203ENST00000524877 EXOGQ9Y2C4 368 aaKnown RBP15.08■□□□□ 0
BEST1-203ENST00000524877 ADAM20O43506 726 aa15.08■□□□□ 0
BEST1-203ENST00000524877 BGLAPP02818 100 aa15.08■□□□□ 0
BEST1-203ENST00000524877 CT45A6P0DMU7 189 aa15.08■□□□□ 0
BEST1-203ENST00000524877 CT45A5P0DMU8 189 aa15.08■□□□□ 0
BEST1-203ENST00000524877 CT45A7P0DMV0 189 aa15.08■□□□□ 0
BEST1-203ENST00000524877 BTG1P62324 171 aa15.08■□□□□ 0
BEST1-203ENST00000524877 C4orf17Q53FE4 359 aa15.08■□□□□ 0
BEST1-203ENST00000524877 PDLIM3Q53GG5 364 aaPredicted RBP15.08■□□□□ 0
BEST1-203ENST00000524877 CT45A1Q5HYN5 189 aa15.08■□□□□ 0
BEST1-203ENST00000524877 CT45A3Q8NHU0 189 aa15.08■□□□□ 0
BEST1-203ENST00000524877 OR2H1Q9GZK4 316 aa15.08■□□□□ 0
BEST1-203ENST00000524877 RAB27BO00194 218 aa15.08■□□□□ 0
BEST1-203ENST00000524877 LINC00271P0C7V0 271 aa15.08■□□□□ 0
BEST1-203ENST00000524877 SMIM18P0DKX4 95 aa15.08■□□□□ 0
BEST1-203ENST00000524877 PRAMEF5Q5TYX0 476 aa15.08■□□□□ 0
BEST1-203ENST00000524877 PRAMEF6Q5VXH4 476 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms