RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PPP1R3C	Q9UQK1	317 aa		3.38	□□□□□ -1.87
PCM1-223	ENST00000524356	MN1	Q10571	1320 aa	Predicted RBP	3.38	□□□□□ -1.87
PCM1-223	ENST00000524356	STK36	Q9NRP7	1315 aa		3.38	□□□□□ -1.87
PCM1-223	ENST00000524356	CSMD1	Q96PZ7	3565 aa		3.38	□□□□□ -1.87
PCM1-223	ENST00000524356	MED13	Q9UHV7	2174 aa		3.38	□□□□□ -1.87
PCM1-223	ENST00000524356	FER1L5	A0AVI2	2057 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	LRBA	P50851	2863 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	IGKV1D-8	A0A087WSZ0	117 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	TRAV19	A0A0A6YYK7	116 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	LOC105371267	A0A1B0GV96	52 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	ANKRD63	C9JTQ0	380 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356		H0Y980	276 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356		K7ENP7	123 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356		M0R036	132 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	ERI3	O43414	337 aa	Known RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	GATC	O43716	136 aa	Known RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	ENSA	O43768	121 aa	Known RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	MAGEC1	O60732	1142 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	GCG	P01275	180 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	RPS17	P08708	135 aa	Known RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	HSD17B1	P14061	328 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	DAO	P14920	347 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	PVR	P15151	417 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	NQO1	P15559	274 aa	Known RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	LOX	P28300	417 aa	Predicted RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	OR1D4	P47884	311 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	RAP1GDS1	P52306	607 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	TAS2R39	P59534	338 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	ERVS71-1	P61550	626 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	LMO4	P61968	165 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	MRPS11	P82912	194 aa	Known RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	SLC25A11	Q02978	314 aa	Known RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	NAB1	Q13506	487 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	ZNF726P1	Q15940	193 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	IL17A	Q16552	155 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	NSUN5P1	Q3KNT7	163 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	GCSAML	Q5JQS6	135 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	MEDAG	Q5VYS4	303 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	LPCAT4	Q643R3	524 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	TMEM215	Q68D42	235 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	NIPAL1	Q6NVV3	410 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356		Q6ZRP5	223 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	FAM19A1	Q7Z5A9	133 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	MRPL52	Q86TS9	123 aa	Known RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	ZNF557	Q8N988	423 aa	Predicted RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	CCDC71L	Q8N9Z2	235 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	OR52B6	Q8NGF0	335 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	OR5AR1	Q8NGP9	310 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	OR13A1	Q8NGR1	328 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	SPPL2A	Q8TCT8	520 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	HGD	Q93099	445 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	SLC25A38	Q96DW6	304 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	SGTB	Q96EQ0	304 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	TMA16	Q96EY4	203 aa	Known RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	SNF8	Q96H20	258 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	CCDC42	Q96M95	316 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	DUX3	Q96PT4	197 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	CGREF1	Q99674	301 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	GABRG3	Q99928	467 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	FOXC2	Q99958	501 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	CHIA	Q9BZP6	476 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	IFT46	Q9NQC8	304 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	C8orf4	Q9NR00	106 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	FGFR1OP2	Q9NVK5	253 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356		Q9UF83	564 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	PAIP2B	Q9ULR5	123 aa	Known RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	GOLT1B	Q9Y3E0	138 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	ZNF337	Q9Y3M9	751 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	KIAA1549L	Q6ZVL6	1849 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	DNHD1	Q96M86	4753 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	CELSR2	Q9HCU4	2923 aa		3.37	□□□□□ -1.87
PCM1-223	ENST00000524356	DENND4C	Q5VZ89	1909 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	ZNF638	Q14966	1978 aa	Known RBP	3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	IGHV4-4	A0A075B6R2	117 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	IGHV3OR16-12	A0A075B7B8	117 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356		A0A0B4J2E0	115 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	KIR2DL5B	A0A0G2JN68	375 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	KIR2DL5B	A0A0G2JPC4	375 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	TEX48	A0A1B0GUV7	120 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356		A0A1B0GVI7	797 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356		A0A1B0GX12	115 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356		B4DXG7	233 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	FTCDNL1	E5RQL4	147 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356		E9PAM4	449 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356		H0YJX3	145 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356		H7C2Y5	167 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	HAT1	O14929	419 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	HPGDS	O60760	199 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	FKBP6	O75344	327 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	AQP8	O94778	261 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	CLDN1	O95832	211 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	IGHG1	P01857	330 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	IGHV4-34	P06331	123 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	HOXC4	P09017	264 aa	Predicted RBP	3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	ZNF35	P13682	527 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	FOLR1	P15328	257 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	ZNF250	P15622	560 aa		3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	HIST1H1C	P16403	213 aa	Known RBP	3.36	□□□□□ -1.87
PCM1-223	ENST00000524356	IGFBP3	P17936	291 aa	Predicted RBP	3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms