RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 HBG1P69891 147 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 HBG2P69892 147 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 MRPS34P82930 218 aaKnown RBP11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 SMIM21Q3B7S5 101 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 PPP1R1CQ8WVI7 109 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 KIF25Q9UIL4 384 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 ZNF14P17017 642 aaPredicted RBP11.52□□□□□ -0.56
PCDHGB1-201ENST00000523390 HOXA1P49639 335 aaPredicted RBP11.52□□□□□ -0.56
PCDHGB1-201ENST00000523390 ST3GAL2Q16842 350 aa11.52□□□□□ -0.56
PCDHGB1-201ENST00000523390 HIKESHIQ53FT3 197 aa11.52□□□□□ -0.56
PCDHGB1-201ENST00000523390 SIGIRRQ6IA17 410 aa11.52□□□□□ -0.56
PCDHGB1-201ENST00000523390 OR6S1Q8NH40 331 aa11.52□□□□□ -0.56
PCDHGB1-201ENST00000523390 GPX8Q8TED1 209 aa11.52□□□□□ -0.56
PCDHGB1-201ENST00000523390 ADAT3Q96EY9 351 aaPredicted RBP11.52□□□□□ -0.56
PCDHGB1-201ENST00000523390 GSX2Q9BZM3 304 aa11.52□□□□□ -0.56
PCDHGB1-201ENST00000523390 ZNHIT1O43257 154 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 TXNDC12O95881 172 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 MT-CO2P00403 227 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 GSK3AP49840 483 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZP4Q12836 540 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 GGTLC2Q14390 218 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 CDCP2Q5VXM1 449 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 GLDNQ6ZMI3 551 aaPredicted RBP11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 MRPL41Q8IXM3 137 aaKnown RBP11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 CHAC2Q8WUX2 184 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 DDA1Q9BW61 102 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 TMPRSS13Q9BYE2 586 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 THADAQ6YHU6 1953 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 DNPH1O43598 174 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 CST2P09228 141 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZNF17P17021 662 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 PPP1CBP62140 327 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZNF674Q2M3X9 581 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 PRAMEF6Q5VXH4 476 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 NLRC3Q7RTR2 1065 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR13C8Q8NGS7 320 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR2H1Q9GZK4 316 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 MAGT1Q9H0U3 335 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 RIMS4Q9H426 269 aaPredicted RBP11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 IGKV3D-11A0A0A0MRZ8 115 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 SOCS1O15524 211 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 SCAND1P57086 179 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 EGR4Q05215 589 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZNF529Q6P280 563 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 FAM58AQ8N1B3 248 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR8U1Q8NH10 309 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 RFESDQ8TAC1 157 aa11.52□□□□□ -0.57
PCDHGB1-201ENST00000523390 KIF26BQ2KJY2 2108 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 CD82P27701 267 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 TMEM128Q5BJH2 165 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 TOR2AQ5JU69 321 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 H2BFWTQ7Z2G1 175 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 TMEM105Q8N8V8 129 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 TMED6Q8WW62 240 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 RPS10P5Q9NQ39 176 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 SDHAF2Q9NX18 166 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 MS4A18H0YCH9 400 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 RECKO95980 971 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 TTRP02766 147 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 GPR12P47775 334 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 MS4A18Q3C1V0 323 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 CDH26Q8IXH8 852 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 RNF141Q8WVD5 230 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 HAS2Q92819 552 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR5B12Q96R08 314 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 PDCD6O75340 191 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 S100PP25815 95 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 EFNB2P52799 333 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 MARVELD1Q9BSK0 173 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 CNTNAP3Q9BZ76 1288 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 PLXNA3P51805 1871 aa11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 INTS1Q8N201 2190 aaKnown RBP11.51□□□□□ -0.57
PCDHGB1-201ENST00000523390 FAM90A27PA6NNH2 459 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 PLA2G10O15496 165 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 AKR1C1Q04828 323 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 BAXQ07812 192 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 ACOT7LQ6ZUV0 252 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 PPP1R32Q7Z5V6 425 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 FAM185AQ8N0U4 392 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 C1orf87Q8N0U7 546 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 OR13G1Q8NGZ3 307 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 ESRP2Q9H6T0 727 aaKnown RBP11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 SLC7A10Q9NS82 523 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 FOXJ2Q9P0K8 574 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 IGLV1-36A0A0B4J1U3 117 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 NPIPB9F8W1W9 429 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 IL5P05113 134 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 AADACP22760 399 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 DHRS2Q13268 280 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 ZNF266Q14584 549 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 PEA15Q15121 130 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 SHISA5Q8N114 240 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 MUC20Q8N307 709 aaPredicted RBP11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 CISD2Q8N5K1 135 aaKnown RBP11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 SUMF2Q8NBJ7 301 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 PXT1Q8NFP0 134 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 B8ZZF3 427 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 LANCL1O43813 399 aa11.5□□□□□ -0.57
PCDHGB1-201ENST00000523390 PNPP00491 289 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms