RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 AQP3Q92482 292 aa13.2□□□□□ -0.3
CTNNA1-236ENST00000522792 USB1Q9BQ65 265 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-236ENST00000522792 MMP28Q9H239 520 aa13.2□□□□□ -0.3
CTNNA1-236ENST00000522792 RBMX2Q9Y388 322 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-236ENST00000522792 IGHV3-64DA0A0J9YX35 117 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 OR5B21A6NL26 309 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 SCGNO76038 276 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 KIR2DL3P43628 341 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 NPBWR2P48146 333 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 GNG3P63215 75 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 PLAC9Q5JTB6 97 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 OLFML2AQ68BL7 652 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 HAGHLQ6PII5 290 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 DNM1P46Q6ZS02 220 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 CELF2-AS1Q8N7Q2 184 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 PXT1Q8NFP0 134 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 RAB3CQ96E17 227 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 SEH1LQ96EE3 360 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 SPEF1Q9Y4P9 236 aa13.19□□□□□ -0.3
CTNNA1-236ENST00000522792 H7C417 338 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 RBBP9O75884 186 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 MT-ND4P03905 459 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 GTF2F2P13984 249 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 BCL3P20749 454 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 TUBG1P23258 451 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 TMEM50BP56557 158 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 CDSNQ15517 529 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 OR8G1Q15617 311 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 PIGYQ3MUY2 71 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 MBNL2Q5VZF2 373 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 WDR86Q86TI4 376 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 LRP11Q86VZ4 500 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 OR8G5Q8NG78 346 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 OR10AD1Q8NGE0 317 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 PRR7Q8TB68 274 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 ARHGAP5-AS1Q96IT6 56 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 Q96M66 194 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 WFIKKN1Q96NZ8 548 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 MICU1Q9BPX6 476 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 RTL8AQ9BWD3 113 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 TM2D1Q9BX74 207 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 TUBG2Q9NRH3 451 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 RBFOX1Q9NWB1 397 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 ZNF581Q9P0T4 197 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 MTFP1Q9UDX5 166 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 DUSP13Q9UII6 198 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 TPRP12270 2363 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 ACACBO00763 2458 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 SYNGR1O43759 233 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 ZNF780AO75290 641 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 KITLGP21583 273 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 CPT2P23786 658 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 BLVRBP30043 206 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 NKX6-1P78426 367 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 FAM189A2Q15884 450 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 TAF9Q16594 264 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 PCGF3Q3KNV8 242 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 TMEM108Q6UXF1 575 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 FBXL14Q8N1E6 418 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 OSR2Q8N2R0 312 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 FAM89BQ8N5H3 189 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 GPX8Q8TED1 209 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 NUDCD2Q8WVJ2 157 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 CNTNAP3BQ96NU0 1288 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 CNTNAP3Q9BZ76 1288 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 OR10A4Q9H209 315 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 MSL2Q9HCI7 577 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 TMEM100Q9NV29 134 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 FAIMQ9NVQ4 179 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 NLKQ9UBE8 527 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 POLEQ07864 2286 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 PCNX1Q96RV3 2341 aa13.18□□□□□ -0.3
CTNNA1-236ENST00000522792 FAM240BA0A1B0GVZ2 78 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 ANKRD20A5PA0PJZ0 165 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 MLNRO43193 412 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 LPLP06858 475 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 HIST1H1DP16402 221 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 UQCRFS1P47985 274 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 SNU13P55769 128 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 C1QTNF12Q5T7M4 302 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 FAAP20Q6NZ36 180 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 C1orf174Q8IYL3 243 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 ZSCAN4Q8NAM6 433 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 ZNF488Q96MN9 340 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 SYT3Q9BQG1 590 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 NUDT16L1Q9BRJ7 211 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 IL36GQ9NZH8 169 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 KCNK7Q9Y2U2 307 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 COL6A6A6NMZ7 2263 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 DPRXA6NFQ7 191 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 CENPXA8MT69 81 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 FOXI3A8MTJ6 420 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 C3orf80F5H4A9 247 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 F8VVB4 439 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 F8VWA3 439 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 ECDO95905 644 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 GSTT2BP0CG30 244 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 GRNP28799 593 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 BTCP35070 178 aa13.17□□□□□ -0.3
CTNNA1-236ENST00000522792 GLRXP35754 106 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms