RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 C9orf170A2RU37 121 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 ANKRD30BLA7E2S9 258 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 LYZL6O75951 148 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 AGTR1P30556 359 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 FOXO1Q12778 655 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 ARL6IP1Q15041 203 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 TSC22D1Q15714 1073 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 SP6Q3SY56 376 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 FAM74A1Q5RGS3 127 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 HAGHLQ6PII5 290 aaPredicted RBP9.89□□□□□ -0.83
CLK4-206ENST00000520878 NUFIP2Q7Z417 695 aaKnown RBP9.89□□□□□ -0.83
CLK4-206ENST00000520878 MKXQ8IYA7 352 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 SLAMF9Q96A28 289 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 PTX4Q96A99 478 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 VRK1Q99986 396 aaPredicted RBP9.89□□□□□ -0.83
CLK4-206ENST00000520878 GSX2Q9BZM3 304 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 CDH20Q9HBT6 801 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 PCDHB16Q9NRJ7 776 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 PIPOXQ9P0Z9 390 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 CSAG2Q9Y5P2 127 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 LIPGQ9Y5X9 500 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 DMDP11532 3685 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 ZNF816-ZNF321PA0A0X1KG74 233 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 HS3ST1O14792 307 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 MPC2O95563 127 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 NGFP01138 241 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 IFNA21P01568 189 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 HPNP05981 417 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 ZNF44P15621 663 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 CBX5P45973 191 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 LUMP51884 338 aaPredicted RBP9.89□□□□□ -0.83
CLK4-206ENST00000520878 SMCO1Q147U7 214 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 OR2T2Q6IF00 324 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 SGPP2Q8IWX5 399 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 ZNF611Q8N823 705 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 KCNIP3Q9Y2W7 256 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 FREM2Q5SZK8 3169 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 LOC390937A0A1W2PQ73 354 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 A6NLC8 198 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 ZNF732B4DXR9 585 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 TRAPPC2LH3BP13 241 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 SSX5O60225 188 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 CYTIPO60759 359 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 OR5H8P0DN80 308 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 ZNF585AQ6P3V2 769 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 SLC22A25Q6T423 547 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 OSR2Q8N2R0 312 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 IL1F10Q8WWZ1 152 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 RDH5Q92781 318 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 BCO1Q9HAY6 547 aa9.89□□□□□ -0.83
CLK4-206ENST00000520878 LSM5Q9Y4Y9 91 aaKnown RBP9.89□□□□□ -0.83
CLK4-206ENST00000520878 A0A1B0GW55 424 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 LDLRAD4O15165 306 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 TPPPO94811 219 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 DUX4L2P0CJ85 424 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 DUX4L3P0CJ86 424 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 DUX4L4P0CJ87 422 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 DUX4L5P0CJ88 424 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 DUX4L6P0CJ89 424 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 DUX4L7P0CJ90 424 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 CSRP1P21291 193 aaKnown RBP9.88□□□□□ -0.83
CLK4-206ENST00000520878 TAS2R31P59538 309 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 GK2Q14410 553 aaPredicted RBP9.88□□□□□ -0.83
CLK4-206ENST00000520878 SPSB1Q96BD6 273 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 MBD2Q9UBB5 411 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 DUX4Q9UBX2 424 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 HSPA12AO43301 675 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 SYNGR3O43761 229 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 NOVA1P51513 510 aaKnown RBP9.88□□□□□ -0.83
CLK4-206ENST00000520878 HGFACQ04756 655 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 CAMK2BQ13554 666 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 RSPO1Q2MKA7 263 aaPredicted RBP9.88□□□□□ -0.83
CLK4-206ENST00000520878 LHFPL2Q6ZUX7 228 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 FAM109AQ8N4B1 249 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 CPEB3Q8NE35 698 aaKnown RBP9.88□□□□□ -0.83
CLK4-206ENST00000520878 UBALD1Q8TB05 177 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 GHRLQ9UBU3 117 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 STARD10Q9Y365 291 aa9.88□□□□□ -0.83
CLK4-206ENST00000520878 ZSCAN5BA6NJL1 495 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 LINC01387J3KSC0 135 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 XRCC2O43543 280 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 FUT6P51993 359 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 TGFBR3Q03167 851 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 ACTBL2Q562R1 376 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 ZNF565Q8N9K5 539 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 SMIM3Q9BZL3 60 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 SH2D2AQ9NP31 389 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 B3GNT2Q9NY97 397 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 NUP210LQ5VU65 1888 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 A0A0B4J2A0 478 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 PRF1P14222 555 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 LHX2P50458 406 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 PRDX4Q13162 271 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 OR5L1Q8NGL2 311 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 GPR137Q96N19 417 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 ZNF581Q9P0T4 197 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 SHPKQ9UHJ6 478 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 MEX3AA1L020 520 aaKnown RBP9.87□□□□□ -0.83
CLK4-206ENST00000520878 OR14I1A6ND48 311 aa9.87□□□□□ -0.83
CLK4-206ENST00000520878 WIPF3A6NGB9 483 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms