RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 TMEM268Q5VZI3 342 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF610Q8N9Z0 462 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 SLC38A9Q8NBW4 561 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 NIPSNAP3BQ9BS92 247 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 FAAP24Q9BTP7 215 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 PECRQ9BY49 303 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 TLX3O43711 291 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 MBPP02686 304 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 GAPDHP04406 335 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 MFAP5Q13361 173 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 OR2T2Q6IF00 324 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 DOK3Q7L591 496 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 OR5AS1Q8N127 324 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 C17orf78Q8N4C9 275 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 NEK7Q8TDX7 302 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 VN1R1Q9GZP7 353 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 MTIF3Q9H2K0 278 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 PIGLQ9Y2B2 252 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 USP34Q70CQ2 3546 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 FAM24AA6NFZ4 105 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 DHRS7CA6NNS2 312 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 CST7O76096 145 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 ONECUT2O95948 504 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 QDPRP09417 244 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 CTHP32929 405 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 FAM69BQ5VUD6 431 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 TMEM123Q8N131 208 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 RBM24Q9BX46 236 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 GPR61Q9BZJ8 451 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 OSGIN2Q9Y236 505 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 LIPGQ9Y5X9 500 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 NSG1A0A0A6YYJ2 146 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF587BE7ETH6 402 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 TSTD3H0UI37 97 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 FOSL1P15407 271 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 QRFPP83859 136 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 COMMD1Q8N668 190 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 DYRK2Q92630 601 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 HAS2Q92819 552 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 ADIPOR1Q96A54 375 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 KCNK17Q96T54 332 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 SYT3Q9BQG1 590 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 GPR173Q9NS66 373 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 PLA2G2EQ9NZK7 142 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 RFNGQ9Y644 331 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 PIAS3Q9Y6X2 628 aa11.29□□□□□ -0.6
TRAPPC9-208ENST00000520857 A0A1B0GV90 55 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 CXorf65A6NEN9 183 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 H0YL77 283 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 RAMP1O60894 148 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 DDAH2O95865 285 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 CD63P08962 238 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 HOXC4P09017 264 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 CAPZBP47756 277 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 RPS23P62266 143 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF239Q16600 458 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 TMEM92Q6UXU6 159 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF721Q8TF20 911 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 SSX3Q99909 188 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 SUCNR1Q9BXA5 334 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 PLEK2Q9NYT0 353 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 STRAPQ9Y3F4 350 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 MMACHCQ9Y4U1 282 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 IGKV1D-8A0A087WSZ0 117 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 H3BQ15 152 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 ADAM10O14672 748 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 SPRY1O43609 319 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 GPR137BO60478 399 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 IGHV2-70P01814 119 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 SEC11BP0C7V7 166 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 DANCRP0C864 163 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 GNRHRP30968 328 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 TMEM240Q5SV17 173 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 DUSP15Q9H1R2 295 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF442Q9H7R0 627 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 CRLF2Q9HC73 371 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF319Q9P2F9 582 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 DMRT1Q9Y5R6 373 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF729A6NN14 1252 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 SERPINE3A8MV23 424 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 RPL23AP62750 156 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 ARL6IP1Q15041 203 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 PYY3Q5JQD4 70 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF429Q86V71 674 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 GKN2Q86XP6 184 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 LFNGQ8NES3 379 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 RAB39BQ96DA2 213 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 TPSD1Q9BZJ3 242 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 FAM86C1Q9NVL1 165 aa11.28□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF705GA8MUZ8 300 aaPredicted RBP11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 MDKP21741 143 aaPredicted RBP11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 DUSP1P28562 367 aa11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 RAB11AP62491 216 aa11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 C17orf67Q0P5P2 114 aa11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 SPEM2Q0P670 501 aa11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 HNF4GQ14541 408 aa11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 TMEM176BQ3YBM2 270 aaPredicted RBP11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 TMEM156Q8N614 296 aa11.27□□□□□ -0.6
TRAPPC9-208ENST00000520857 PLPP5Q8NEB5 264 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms