RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 CCDC71LQ8N9Z2 235 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 OR13C8Q8NGS7 320 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 RPS4Y2Q8TD47 263 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 SIGLEC12Q96PQ1 595 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 TRIB1Q96RU8 372 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.89□□□□□ -0.99
MCF2-209ENST00000520602 ZNF705EA8MWA4 302 aaPredicted RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 KCNAB3O43448 404 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 GRPP07492 148 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 CST2P09228 141 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 PRKACAP17612 351 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 FUT6P51993 359 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 C2orf68Q2NKX9 166 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 DEFB109BQ30KR1 87 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 ACOT7LQ6ZUV0 252 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 CDH26Q8IXH8 852 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 EMG1Q92979 244 aaKnown RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 SLAMF9Q96A28 289 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 PTX4Q96A99 478 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 ZC3H10Q96K80 434 aaKnown RBP8.89□□□□□ -0.99
MCF2-209ENST00000520602 ARPC5LQ9BPX5 153 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 TTTY12Q9BZ98 90 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 SDHAF2Q9NX18 166 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 CACNA1DQ01668 2161 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 XIRP2A4UGR9 3374 aa8.89□□□□□ -0.99
MCF2-209ENST00000520602 IGLV3-32A0A0A0MS00 114 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 LGALS8O00214 317 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 GEMIN2O14893 280 aaKnown RBP8.88□□□□□ -0.99
MCF2-209ENST00000520602 AKR1C2P52895 323 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 AKR1C1Q04828 323 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 ZNF616Q08AN1 781 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 C11orf87Q6NUJ2 197 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 JMJD6Q6NYC1 403 aaPredicted RBP8.88□□□□□ -0.99
MCF2-209ENST00000520602 RNF144BQ7Z419 303 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 TMEM251Q8N6I4 163 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 ZNF611Q8N823 705 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 SUMF1Q8NBK3 374 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 FBXW5Q969U6 566 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 C21orf140B9A014 251 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 TPD52L2O43399 206 aaKnown RBP8.88□□□□□ -0.99
MCF2-209ENST00000520602 PIGPP57054 158 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 PIGYQ3MUY2 71 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 TOR2AQ5JU69 321 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 OR5M8Q8NGP6 311 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 SLC25A28Q96A46 364 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 GPR137Q96N19 417 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 TSNAXQ99598 290 aaKnown RBP8.88□□□□□ -0.99
MCF2-209ENST00000520602 HRH4Q9H3N8 390 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 DEPPQ9NTK1 212 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 NBASA2RRP1 2371 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 C5orf63A6NC05 138 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 PCNX2A6NKB5 2137 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 LINC01387J3KSC0 135 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 K7EPK0 472 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 ZNF92Q03936 586 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 BTN1A1Q13410 526 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 CAMK2BQ13554 666 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 ZNF239Q16600 458 aaKnown RBP8.88□□□□□ -0.99
MCF2-209ENST00000520602 OR2T2Q6IF00 324 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 FIP1L1Q6UN15 594 aaKnown RBP8.88□□□□□ -0.99
MCF2-209ENST00000520602 CMTM1Q8IZ96 169 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 FAM71E2Q8N5Q1 922 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 OR5AP2Q8NGF4 316 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 AQP3Q92482 292 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 NPDC1Q9NQX5 325 aaPredicted RBP8.88□□□□□ -0.99
MCF2-209ENST00000520602 LUZP4Q9P127 313 aa8.88□□□□□ -0.99
MCF2-209ENST00000520602 ZFHX2Q9C0A1 2572 aaPredicted RBP8.88□□□□□ -0.99
MCF2-209ENST00000520602 C9orf172C9J069 976 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 DNPH1O43598 174 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 NXPH3O95157 252 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 ARR3P36575 388 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 FBXW12Q6X9E4 464 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 ZDHHC23Q8IYP9 409 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 TMED6Q8WW62 240 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 ST8SIA2Q92186 375 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 SH3BGRL2Q9UJC5 107 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 A0A0C4DFX4 3053 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 TECTAO75443 2155 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 BORCS7-ASMTA0A0B4J1R7 106 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 A0A0U1RQV5 110 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 ADAM10O14672 748 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 OR2F2O95006 317 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 OMGP23515 440 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 OR2F1Q13607 317 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 SLC25A42Q86VD7 318 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 PXT1Q8NFP0 134 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 UBALD1Q8TB05 177 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 APOBEC3DQ96AK3 386 aaPredicted RBP8.87□□□□□ -0.99
MCF2-209ENST00000520602 PARP12Q9H0J9 701 aaKnown RBP8.87□□□□□ -0.99
MCF2-209ENST00000520602 C12orf4Q9NQ89 552 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 ARPC4-TTLL3A0A0A6YYG9 625 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 OR6C65A6NJZ3 312 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 TMEM14DPA8MWL7 114 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 H3BUI4 141 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 MPC2O95563 127 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 DUS4LO95620 317 aaKnown RBP8.87□□□□□ -0.99
MCF2-209ENST00000520602 HPNP05981 417 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 SERPINE2P07093 398 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 P2RX3P56373 397 aa8.87□□□□□ -0.99
MCF2-209ENST00000520602 PMP22Q01453 160 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms