RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 CRMP1Q14194 572 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 FASTKD3Q14CZ7 662 aaKnown RBP2.36□□□□□ -2.03
CPNE3-204ENST00000517862 C17orf58Q2M2W7 97 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 LEMD1Q68G75 181 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 FAM183BPQ6ZVS7 135 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 ZNF767PQ75MW2 155 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 EIF3MQ7L2H7 374 aaKnown RBP2.36□□□□□ -2.03
CPNE3-204ENST00000517862 ABHD12BQ7Z5M8 362 aaPredicted RBP2.36□□□□□ -2.03
CPNE3-204ENST00000517862 CCDC50Q8IVM0 306 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 CCDC65Q8IXS2 484 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 KATNAL2Q8IYT4 538 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 GTPBP8Q8N3Z3 284 aaPredicted RBP2.36□□□□□ -2.03
CPNE3-204ENST00000517862 MORN4Q8NDC4 146 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 OR4X2Q8NGF9 303 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 OR2L8Q8NGY9 312 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 MIPOL1Q8TD10 442 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 MAGEE2Q8TD90 523 aaPredicted RBP2.36□□□□□ -2.03
CPNE3-204ENST00000517862 ELMO1Q92556 727 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 NEURL3Q96EH8 262 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 PLEKHA8Q96JA3 519 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 MS4A14Q96JA4 679 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 NOL4LQ96MY1 436 aaPredicted RBP2.36□□□□□ -2.03
CPNE3-204ENST00000517862 RNF2Q99496 336 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 ZNF442Q9H7R0 627 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 GEMIN7Q9H840 131 aaKnown RBP2.36□□□□□ -2.03
CPNE3-204ENST00000517862 TUBA4BQ9H853 241 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 REEP1Q9H902 201 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 NMRAL1Q9HBL8 299 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 TIGARQ9NQ88 270 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 PCYOX1Q9UHG3 505 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 PITPNC1Q9UKF7 332 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 SPATA2Q9UM82 520 aa2.36□□□□□ -2.03
CPNE3-204ENST00000517862 NACAE9PAV3 2078 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 IGHV3OR16-12A0A075B7B8 117 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 KIR2DS1A0A191URI9 304 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 ZNF487B1APH4 448 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 IGLL5B9A064 214 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 C12orf77C9JDV5 145 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 PSMD12O00232 456 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 MANBAO00462 879 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 PRKYO43930 277 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 OR10H3O60404 316 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 PFKFB2O60825 505 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 OXSR1O95747 527 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 IGLV1-44P01699 117 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 KRT14P02533 472 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 FTH1P02794 183 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 IFNA16P05015 189 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CRYGBP07316 175 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 KRTAP2-3P0C7H8 128 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 PIRTP0C851 137 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 RALBP11234 206 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 SERPINA2P20848 420 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 GTF2E2P29084 291 aaKnown RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CMPK1P30085 196 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 FGF9P31371 208 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CDH5P33151 784 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CRYBB2P43320 205 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 VDAC2P45880 294 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 INSL3P51460 131 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 PRKXP51817 358 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CRIP2P52943 208 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 RAB10P61026 200 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 RPL26P61254 145 aaKnown RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 RND3P61587 244 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CCL8P80075 99 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 RIPPLY1Q0D2K3 151 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 GRB7Q14451 532 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 TGFBIQ15582 683 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 DPYSL2Q16555 572 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CYP51A1Q16850 503 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 AGBL2Q5U5Z8 902 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 MEDAGQ5VYS4 303 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 TTC19Q6DKK2 380 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 C6orf89Q6UWU4 347 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 BZW1Q7L1Q6 419 aaKnown RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 LYPD6Q86Y78 171 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 ZNF614Q8N883 585 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CEP112Q8N8E3 955 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 C15orf54Q8N8G6 183 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 FAM184AQ8NB25 1140 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 OR52H1Q8NGJ2 320 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 NUBPLQ8TB37 319 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 ANKRD49Q8WVL7 239 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 DNAJA4Q8WW22 397 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 RAPGEF5Q92565 580 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 UBE2E3Q969T4 207 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 MCUR1Q96AQ8 359 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 TMEM80Q96HE8 168 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 CLCC1Q96S66 551 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 ZNF670Q9BS34 389 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 NIPSNAP3BQ9BS92 247 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 HCAR1Q9BXC0 346 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 KRTAP2-4Q9BYR9 128 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 ANKRD19PQ9H560 264 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 ZNF385DQ9H6B1 395 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 PATZ1Q9HBE1 687 aaKnown RBP2.35□□□□□ -2.03
CPNE3-204ENST00000517862 AHSPQ9NZD4 102 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 BFARQ9NZS9 450 aa2.35□□□□□ -2.03
CPNE3-204ENST00000517862 RIMS3Q9UJD0 308 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms