RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 ZFP2Q6ZN57 461 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 ZNF738Q8NE65 137 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 OR7G1Q8NGA0 311 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 OR4K17Q8NGC6 315 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 ZNF461Q8TAF7 563 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 CIRBP-AS1Q8TBR5 109 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 GTF2H4Q92759 462 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 GHSRQ92847 366 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 LRRC45Q96CN5 670 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 Q96MT0 163 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 VAT1Q99536 393 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 MED10Q9BTT4 135 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 NXF2Q9GZY0 626 aaKnown RBP2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 MS4A12Q9NXJ0 267 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 OPN4Q9UHM6 478 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 PRO0628Q9UI54 55 aa2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 NOSIPQ9Y314 301 aaKnown RBP2.04□□□□□ -2.08
RNU6-840P-201ENST00000517275 IGLV3-16A0A075B6K0 115 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 IGHV3-49A0A0A0MS15 119 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 IGKV6-21A0A0C4DH24 114 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 UPK2O00526 184 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 CRXO43186 299 aaPredicted RBP2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 CALUO43852 315 aaPredicted RBP2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 VAMP5O95183 116 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 SNRPAP09012 282 aaKnown RBP2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 OR4Q2P0C623 313 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 LINC00869P0C866 280 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 TEAD1P28347 426 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 CRATP43155 626 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 GCLMP48507 274 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 TMEM249Q2WGJ8 235 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 CEACAM21Q3KPI0 293 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 YIF1BQ5BJH7 314 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 CLLU1OSQ5K130 101 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 ZNF684Q5T5D7 378 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 FAM222AQ5U5X8 452 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 Q6ZSR6 202 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 AHSA2Q719I0 299 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 SSX7Q7RTT5 188 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 SELENOHQ8IZQ5 122 aaKnown RBP2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 SLC34A3Q8N130 599 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 TMEM256Q8N2U0 113 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 ATPAF2Q8N5M1 289 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 TTLQ8NG68 377 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 OR4K2Q8NGD2 314 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 OR5M1Q8NGP8 315 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 OR5P2Q8WZ92 322 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 ESR2Q92731 530 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 SLC25A46Q96AG3 418 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 CATSPER2Q96P56 530 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 RNF5Q99942 180 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 NUDT9Q9BW91 350 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 TSGA10Q9BZW7 698 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 LHX5Q9H2C1 402 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 TMEM100Q9NV29 134 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 RBM22Q9NW64 420 aaKnown RBP eCLIP2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 ZNHIT6Q9NWK9 470 aaKnown RBP2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 DNAJC27Q9NZQ0 273 aa2.03□□□□□ -2.08
RNU6-840P-201ENST00000517275 PRRC2AP48634 2157 aaKnown RBP2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 DOCK9Q9BZ29 2069 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 IGHV1-3A0A0C4DH29 117 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 C5orf63A6NC05 138 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 OR2AT4A6NND4 320 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 F8VZ95 297 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 SLC37A4O43826 429 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 GIMD1P0DJR0 217 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 HLA-GP17693 338 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 IL1RNP18510 177 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 SYT1P21579 422 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 PSMB6P28072 239 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 KDELR2P33947 212 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 RPA3P35244 121 aaPredicted RBP2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 UGT2B10P36537 528 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 MAGEA3P43357 314 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 PFN3P60673 137 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 GRB2P62993 217 aaKnown RBP2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 IL5RAQ01344 420 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 ADIGQ0VDE8 80 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 ZNF816Q0VGE8 651 aaPredicted RBP2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 STX4Q12846 297 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 TPBGQ13641 420 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 MAPRE2Q15555 327 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 ZNF404Q494X3 552 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 TIMM23BQ5SRD1 257 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 FAM104BQ5XKR9 115 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 HBMQ6B0K9 141 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 FAM71E1Q6IPT2 247 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 ZFP1Q6P2D0 407 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 MORN3Q6PF18 240 aaPredicted RBP2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 UGT2A3Q6UWM9 527 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 KRTAP11-1Q8IUC1 163 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 CD302Q8IX05 232 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 ZNF645Q8N7E2 425 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 SLC35G3Q8N808 338 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 OR4M2Q8NGB6 313 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 OR52N1Q8NH53 320 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 NEURL3Q96EH8 262 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 OR2M4Q96R27 311 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 TBL1YQ9BQ87 522 aa2.02□□□□□ -2.09
RNU6-840P-201ENST00000517275 ZSCAN16Q9H4T2 348 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms