RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PTGFRP43088 359 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 HAAOP46952 286 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 CAPZA1P52907 286 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 VBP1P61758 197 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 NCS1P62166 190 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 MPPED2Q15777 294 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 SPRNQ5BIV9 151 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 WDR82Q6UXN9 313 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 NR2C2APQ86WQ0 139 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 CALHM1Q8IU99 346 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 MKXQ8IYA7 352 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 Q8IYB0 196 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 PNLDC1Q8NA58 520 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 OR6M1Q8NGM8 313 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 ZNF671Q8TAW3 534 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 TRMT10AQ8TBZ6 339 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 NPRL2Q8WTW4 380 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 RDH5Q92781 318 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 DGCR14Q96DF8 476 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 FAM192AQ9GZU8 254 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 RNF167Q9H6Y7 350 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 GHRLQ9UBU3 117 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 RSL24D1Q9UHA3 163 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 METRNQ9UJH8 293 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 PPP1R3CQ9UQK1 317 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 NAV3Q8IVL0 2385 aa10.11□□□□□ -0.79
PDLIM5-220ENST00000514830 LRRC30A6NM36 301 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 IFITM5A6NNB3 132 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 SRRM5B3KS81 715 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 AIPO00170 330 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 RP2O75695 350 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 CDRT1O95170 752 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 LHBP01229 141 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 IGHV4-39P01824 125 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 GRPP07492 148 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 UBBP0CG47 229 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 PGA5P0DJD9 388 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 DNASE1P24855 282 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 RPS19P39019 145 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 PMELP40967 661 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 PTH2RP49190 550 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 SCAND1P57086 179 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 ERVK11-1P61568 191 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 LSM3P62310 102 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 PRAMEF6Q5VXH4 476 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 ELP2Q6IA86 826 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 HAGHLQ6PII5 290 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 FAM90A1Q86YD7 464 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 POC1AQ8NBT0 407 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 OR11L1Q8NGX0 322 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 TBC1D15Q8TC07 691 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 SLC25A28Q96A46 364 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 SLC25A46Q96AG3 418 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 C12orf43Q96C57 262 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 POM121Q96HA1 1249 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 C1orf147Q96MC9 270 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 SPACA5Q96QH8 159 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 MRI1Q9BV20 369 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 CNTD2Q9H8S5 307 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 HES4Q9HCC6 221 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 RASL12Q9NYN1 266 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 RNF7Q9UBF6 113 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 FBLN5Q9UBX5 448 aa10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 AK6Q9Y3D8 172 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-220ENST00000514830 MTORP42345 2549 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 CDIPTO14735 213 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 TPD52L2O43399 206 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 ZNF780AO75290 641 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 KDM4BO94953 1096 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 CYB5AP00167 134 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 CSF3P09919 207 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 DAOP14920 347 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 GIFP27352 417 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 HTR2CP28335 458 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 TGFBR1P36897 503 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 SERPINB10P48595 397 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 BMXP51813 675 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 TMEM33P57088 247 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 DYNC1I2Q13409 638 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 GPR176Q14439 515 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 HFEQ30201 348 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 DEFB113Q30KQ7 82 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 DMRTC1Q5HYR2 192 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 DNM1P46Q6ZS02 220 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 RNF144BQ7Z419 303 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 MOGAT3Q86VF5 341 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 ANGPTL5Q86XS5 388 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 C1orf87Q8N0U7 546 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 JAGN1Q8N5M9 183 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 NRGNQ92686 78 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 GPER1Q99527 375 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 NRIP2Q9BQI9 281 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 DCSTAMPQ9H295 470 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 CHODLQ9H9P2 273 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 SEBOXQ9HB31 216 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 PCDHB16Q9NRJ7 776 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 TMEM106BQ9NUM4 274 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 C1orf123Q9NWV4 160 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 STEAP1Q9UHE8 339 aa10.09□□□□□ -0.79
PDLIM5-220ENST00000514830 PLEKHA6Q9Y2H5 1048 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms