RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ZNF391Q9UJN7 358 aa2.45□□□□□ -2.02
HMGCS1-207ENST00000514610 ZNF229Q9UJW7 825 aa2.45□□□□□ -2.02
HMGCS1-207ENST00000514610 KIF27Q86VH2 1401 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 OR6C70A6NIJ9 312 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 MBP02144 154 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 OR5AC1P0C628 307 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 INAFM2P0DMQ5 153 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 CPN2P22792 545 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 CD34P28906 385 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 RPL31P62899 125 aaKnown RBP2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 MEF2CQ06413 473 aaPredicted RBP2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 MAPRE2Q15555 327 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 TTC32Q5I0X7 151 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 FAM27D1Q5T7N8 215 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 C16orf87Q6PH81 154 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 ADM2Q7Z4H4 148 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 PRNTQ86SH4 94 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 LRRC8AQ8IWT6 810 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 TNFRSF14Q92956 283 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 YIPF6Q96EC8 236 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 TFR2Q9UP52 801 aa2.44□□□□□ -2.02
HMGCS1-207ENST00000514610 IGKV2-24A0A0C4DH68 120 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 IZUMO1RA6ND01 250 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 KDELR3O43731 214 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 NRASP01111 189 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 HRASP01112 189 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 KRASP01116 189 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 SEC11BP0C7V7 166 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 CD9P21926 228 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 RGS6P49758 472 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 PSMC5P62195 406 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 ATP5G2Q06055 141 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 IFFO1Q0D2I5 559 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 NDUFAF6Q330K2 333 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 NKAIN1Q4KMZ8 207 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 SPIN3Q5JUX0 258 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 ARHGAP18Q8N392 663 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 ZFP62Q8NB50 900 aaPredicted RBP2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 NDNFQ8TB73 568 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 ZFAND1Q8TCF1 268 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 CENPNQ96H22 339 aaPredicted RBP2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 SPACA5Q96QH8 159 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 TSNAXQ99598 290 aaKnown RBP2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 PORCNQ9H237 461 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 FAM60AQ9NP50 221 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 DDIT4Q9NX09 232 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 ZNF492Q9P255 531 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 STX18Q9P2W9 335 aaKnown RBP2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 ORC6Q9Y5N6 252 aa2.43□□□□□ -2.02
HMGCS1-207ENST00000514610 IGKV3D-11A0A0A0MRZ8 115 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 FAM240AA0A1B0GVK7 77 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 OR5AL1P0C617 328 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 ZNF35P13682 527 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 HLA-GP17693 338 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 OR12D2P58182 307 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 LAMTOR4Q0VGL1 99 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 PMVKQ15126 192 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 CDNFQ49AH0 187 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 DUPD1Q68J44 220 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 SETD3Q86TU7 594 aaPredicted RBP2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 ITPRIPQ8IWB1 547 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 OR4K2Q8NGD2 314 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 OR4D6Q8NGJ1 314 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 ORAOV1Q8WV07 137 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 TVP23CQ96ET8 276 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 ZBED3Q96IU2 234 aaPredicted RBP2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 IFNKQ9P0W0 207 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 HMGXB4Q9UGU5 601 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 NPHP4O75161 1426 aaPredicted RBP2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 SDK2Q58EX2 2172 aa2.42□□□□□ -2.02
HMGCS1-207ENST00000514610 UPK1AO00322 258 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 DHRS3O75911 302 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 HRES1P13985 223 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 TEAD1P28347 426 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 PSMB2P49721 201 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 PRKCDQ05655 676 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 WDR43Q15061 677 aaKnown RBP eCLIP2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 TAF9Q16594 264 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 THOC7Q6I9Y2 204 aaKnown RBP2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 FA2HQ7L5A8 372 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 ZNF664Q8N3J9 261 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 OR4C13Q8NGP0 309 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 ITLN2Q8WWU7 325 aaPredicted RBP2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 RNF170Q96K19 258 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 TMED9Q9BVK6 235 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 TRIM45Q9H8W5 580 aaPredicted RBP2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 RDH14Q9HBH5 336 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 C6orf50Q9HD87 102 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 LZTFL1Q9NQ48 299 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 ZNF302Q9NR11 478 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 TMEM38BQ9NVV0 291 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 CFL2Q9Y281 166 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 KLF13Q9Y2Y9 288 aaPredicted RBP2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 SLC22A7Q9Y694 548 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 R4GN34 69 aa2.41□□□□□ -2.02
HMGCS1-207ENST00000514610 TRAV8-7A0A075B6U6 113 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 H7C2Y5 167 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 M0R1B8 84 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 ALOX12BO75342 701 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 KLHL2O95198 593 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms