RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 Q71RC1 249 aaPredicted RBP6.85□□□□□ -1.31
NEDD4-210ENST00000513957 SLC36A1Q7Z2H8 476 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 WDR86Q86TI4 376 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 FAM90A1Q86YD7 464 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 C11orf53Q8IXP5 236 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 PRSS35Q8N3Z0 413 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 DNAAF1Q8NEP3 725 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 OR52N1Q8NH53 320 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 ZNF671Q8TAW3 534 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 CNIH3Q8TBE1 160 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 RPS4Y2Q8TD47 263 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 THRSPQ92748 146 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 DVL3Q92997 716 aaPredicted RBP6.85□□□□□ -1.31
NEDD4-210ENST00000513957 SPSB1Q96BD6 273 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 CPNE2Q96FN4 548 aaPredicted RBP6.85□□□□□ -1.31
NEDD4-210ENST00000513957 TMEM80Q96HE8 168 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 RNF170Q96K19 258 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 NUDT16L1Q9BRJ7 211 aaKnown RBP6.85□□□□□ -1.31
NEDD4-210ENST00000513957 TMEM246Q9BRR3 403 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 SSBP3Q9BWW4 388 aaPredicted RBP6.85□□□□□ -1.31
NEDD4-210ENST00000513957 BEX2Q9BXY8 128 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 TMPRSS13Q9BYE2 586 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 ANKRD60Q9BZ19 345 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 PKIBQ9C010 78 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 AMBNQ9NP70 447 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 DCAF16Q9NXF7 216 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 RASL12Q9NYN1 266 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 ERVK-18Q9QC07 812 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 NKX1-2Q9UD57 310 aaPredicted RBP6.85□□□□□ -1.31
NEDD4-210ENST00000513957 OR5V1Q9UGF6 321 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 SLC7A11Q9UPY5 501 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 MYRFQ9Y2G1 1151 aa6.85□□□□□ -1.31
NEDD4-210ENST00000513957 SONP18583 2426 aaKnown RBP6.85□□□□□ -1.31
NEDD4-210ENST00000513957 PQLC2LA1A4F0 135 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 MEGF11A6BM72 1044 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 OR4C45A6NMZ5 311 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 ZNF732B4DXR9 585 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 J3QT63 122 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 CDIPTO14735 213 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 PLPP2O43688 288 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 NOS1APO75052 506 aaPredicted RBP6.84□□□□□ -1.31
NEDD4-210ENST00000513957 ALX3O95076 343 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 ECDO95905 644 aaPredicted RBP6.84□□□□□ -1.31
NEDD4-210ENST00000513957 AVPP01185 164 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 LIPFP07098 398 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 GNAO1P09471 354 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 LIMS3P0CW19 117 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 LIMS4P0CW20 117 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 SRD5A1P18405 259 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 MPZP25189 248 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 KIR3DL2P43630 455 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 PITPNBP48739 271 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 FUT6P51993 359 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 AQP4P55087 323 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 NANOS3P60323 173 aaKnown RBP6.84□□□□□ -1.31
NEDD4-210ENST00000513957 GNB2P62879 340 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 SMN1Q16637 294 aaKnown RBP6.84□□□□□ -1.31
NEDD4-210ENST00000513957 CR1LQ2VPA4 569 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 CEP78Q5JTW2 689 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 FAM120AOSQ5T036 256 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 ATPAF1Q5TC12 328 aaPredicted RBP6.84□□□□□ -1.31
NEDD4-210ENST00000513957 DCAF12L2Q5VW00 463 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 RNLSQ5VYX0 342 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 CD276Q5ZPR3 534 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 RPL22L1Q6P5R6 122 aaKnown RBP6.84□□□□□ -1.31
NEDD4-210ENST00000513957 BTNL3Q6UXE8 466 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 MOB3CQ70IA8 216 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 LHFPL3Q86UP9 236 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 ZNF676Q8N7Q3 588 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 SCCPDHQ8NBX0 429 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 OR5AK2Q8NH90 309 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 LRRC29Q8WV35 223 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 OR51I2Q9H344 312 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 RHOFQ9HBH0 211 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 SMURF1Q9HCE7 757 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 CLN8Q9UBY8 286 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 AASSQ9UDR5 926 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 PSORS1C1Q9UIG5 152 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 NAV3Q8IVL0 2385 aa6.84□□□□□ -1.31
NEDD4-210ENST00000513957 IGHV3-64DA0A0J9YX35 117 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 NKX6-3A6NJ46 265 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 KIAA1324LA8MWY0 1029 aaPredicted RBP6.83□□□□□ -1.32
NEDD4-210ENST00000513957 TNFRSF13BO14836 293 aaPredicted RBP6.83□□□□□ -1.32
NEDD4-210ENST00000513957 MYL12BO14950 172 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 ZFPL1O95159 310 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 ATP6V1G2O95670 118 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 MT-ND2P03891 347 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 CD1AP06126 327 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 CD2P06729 351 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 ZNF20P17024 532 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 PRKACBP22694 351 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 MYF6P23409 242 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 BDH1Q02338 343 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 ST3GAL4Q11206 333 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 IL24Q13007 206 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 CDK5R1Q15078 307 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 SMIM21Q3B7S5 101 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 STUMQ69YW2 141 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 ZNF826PQ6ZT77 177 aa6.83□□□□□ -1.32
NEDD4-210ENST00000513957 SERPINA12Q8IW75 414 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms