RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SLC7A11Q9UPY5 501 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 NPTNQ9Y639 398 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 CREBBPQ92793 2442 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 HIVEP1P15822 2718 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 TRBV5-7A0A0A0MS05 114 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 A0A1B0GW55 424 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 LRRC30A6NM36 301 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF879B4DU55 563 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 J3QT63 122 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 SULT1B1O43704 296 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 ANGPTL7O43827 346 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 MRPS14O60783 128 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 SERPINA3P01011 423 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 CD2P06729 351 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 DUX4L2P0CJ85 424 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 DUX4L3P0CJ86 424 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 DUX4L4P0CJ87 422 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 DUX4L5P0CJ88 424 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 DUX4L6P0CJ89 424 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 DUX4L7P0CJ90 424 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 CALCBP10092 127 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 FUT6P51993 359 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 GP2P55259 537 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 SEC61A1P61619 476 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 FABP5Q01469 135 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 MZT1Q08AG7 82 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 TPBGQ13641 420 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 ACSM3Q53FZ2 586 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 UBE2UQ5VVX9 321 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 CRIP3Q6Q6R5 217 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 DUX4L9Q6RFH8 374 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 SPNS3Q6ZMD2 512 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 UTS2BQ765I0 119 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 SERPINA12Q8IW75 414 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 DNAAF1Q8NEP3 725 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 TSPAN14Q8NG11 270 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 OR52N4Q8NGI2 321 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 AQP3Q92482 292 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 HPS1Q92902 700 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 RAB1CQ92928 201 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 SLAMF9Q96A28 289 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 C10orf35Q96D05 121 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 TIMD4Q96H15 378 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 COX4I2Q96KJ9 171 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 GAL3ST1Q99999 423 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 PPIL3Q9H2H8 161 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 LPAR2Q9HBW0 351 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 DUX4Q9UBX2 424 aa8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 SF3B6Q9Y3B4 125 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-209ENST00000513818 PPIAL4EA0A075B759 164 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 CEACAM18A8MTB9 384 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 PPIAL4DF5H284 164 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 F8VVB4 439 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 F8VWA3 439 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 GABRPO00591 440 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 RGS9O75916 674 aaPredicted RBP8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 GYPAP02724 150 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 MAS1P04201 325 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 CD1AP06126 327 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 PPIAL4FP0DN26 164 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 RAB3AP20336 220 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 USF1P22415 310 aaPredicted RBP8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 CEBPDP49716 269 aaPredicted RBP8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 RBP2P50120 134 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 SNU13P55769 128 aaKnown RBP8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 MTCP1P56278 107 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 TMEM33P57088 247 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 PPP3R1P63098 170 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNF181Q2M3W8 571 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 DDI2Q5TDH0 399 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 LYPD2Q6UXB3 125 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 TMEM91Q6ZNR0 172 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 LHFPL2Q6ZUX7 228 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 SLC25A26Q70HW3 274 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 CEACAM19Q7Z692 300 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 PEG10Q86TG7 708 aaKnown RBP8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 SATL1Q86VE3 508 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNF573Q86YE8 665 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 OR5T2Q8NGG2 359 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 MUL1Q969V5 352 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 ERGIC1Q969X5 290 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 SPSB1Q96BD6 273 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 FAM192AQ9GZU8 254 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 NEK6Q9HC98 313 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 ISYNA1Q9NPH2 558 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 NDUFB11Q9NX14 153 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 IL36RNQ9UBH0 155 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 PPIAL4AQ9Y536 164 aa8.21□□□□□ -1.1
TOPBP1-209ENST00000513818 A0A087WXM4 84 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 IGKV1-12A0A0C4DH73 117 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 OOEPA6NGQ2 149 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 SRRM5B3KS81 715 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 FAM157AC9JC47 383 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 LGALS8O00214 317 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 CCRL2O00421 344 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 IGKV1D-12P01611 117 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 PGA5P0DJD9 388 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 SELLP14151 372 aa8.2□□□□□ -1.1
TOPBP1-209ENST00000513818 CD99P14209 185 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms