RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 PALMDQ9NP74 551 aa8.69□□□□□ -1.02
DDX41-216ENST00000513562 BRD7Q9NPI1 651 aa8.69□□□□□ -1.02
DDX41-216ENST00000513562 TBC1D23Q9NUY8 699 aa8.69□□□□□ -1.02
DDX41-216ENST00000513562 MRGBPQ9NV56 204 aa8.69□□□□□ -1.02
DDX41-216ENST00000513562 VNN3Q9NY84 501 aa8.69□□□□□ -1.02
DDX41-216ENST00000513562 CSMD3Q7Z407 3707 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 GSTA4O15217 222 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 OR2F2O95006 317 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 GYPBP06028 91 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 LUMP51884 338 aaPredicted RBP8.68□□□□□ -1.02
DDX41-216ENST00000513562 GP2P55259 537 aaKnown RBP8.68□□□□□ -1.02
DDX41-216ENST00000513562 IL18R1Q13478 541 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 CEACAM21Q3KPI0 293 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 CEP78Q5JTW2 689 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 KCTD18Q6PI47 426 aaPredicted RBP8.68□□□□□ -1.02
DDX41-216ENST00000513562 HAGHLQ6PII5 290 aaPredicted RBP8.68□□□□□ -1.02
DDX41-216ENST00000513562 C18orf65Q6ZTR6 163 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 TCF23Q7RTU1 214 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 NDNFQ8TB73 568 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 FAM162AQ96A26 154 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 ZNF488Q96MN9 340 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 OR8B4Q96RC9 309 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 SLC25A33Q9BSK2 321 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 ABHD6Q9BV23 337 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 NMNAT2Q9BZQ4 307 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 EGLN3Q9H6Z9 239 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 VIPAS39Q9H9C1 493 aa8.68□□□□□ -1.02
DDX41-216ENST00000513562 IGHV2-26A0A0B4J1V2 119 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 PSMB11A5LHX3 300 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 SH2D7A6NKC9 451 aaPredicted RBP8.67□□□□□ -1.02
DDX41-216ENST00000513562 OR5B21A6NL26 309 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 NME4O00746 187 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 SLC22A2O15244 555 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 EDF1O60869 148 aaKnown RBP8.67□□□□□ -1.02
DDX41-216ENST00000513562 SPI1P17947 270 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 CD24P25063 80 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 BLVRAP53004 296 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 ACTA2P62736 377 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 ACTG2P63267 376 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 ACTC1P68032 377 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 ACTA1P68133 377 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 TSPAN31Q12999 210 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 CRMP1Q14194 572 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 KRT72Q14CN4 511 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 ZNF329Q86UD4 541 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 LINC00471Q8N535 108 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 OR52L1Q8NGH7 329 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 OR5A2Q8NGI9 324 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 OR6K6Q8NGW6 343 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 BCAS4Q8TDM0 211 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 RBM14Q96PK6 669 aaKnown RBP8.67□□□□□ -1.02
DDX41-216ENST00000513562 AMELYQ99218 206 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 ZFP57Q9NU63 452 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 NKX1-2Q9UD57 310 aaPredicted RBP8.67□□□□□ -1.02
DDX41-216ENST00000513562 CDH10Q9Y6N8 788 aa8.67□□□□□ -1.02
DDX41-216ENST00000513562 MEX3AA1L020 520 aaKnown RBP8.66□□□□□ -1.02
DDX41-216ENST00000513562 NUDT19A8MXV4 375 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 K7N7A8 449 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 NOS1APO75052 506 aaPredicted RBP8.66□□□□□ -1.02
DDX41-216ENST00000513562 DNAJC8O75937 253 aaPredicted RBP8.66□□□□□ -1.02
DDX41-216ENST00000513562 GADD45GO95257 159 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 CLUP10909 449 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 NCK1P16333 377 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 IFNGR2P38484 337 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 SMIM11AP58511 58 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 LINC01590Q5TEZ4 76 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 RPL13AP3Q6NVV1 102 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 PLBD1Q6P4A8 553 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 KLHL30-AS1Q8NEE0 82 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 OR4P4Q8NGL7 312 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 OR6N2Q8NGY6 317 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 RCN3Q96D15 328 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 ZNF714Q96N38 554 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 NRIP2Q9BQI9 281 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 CLEC7AQ9BXN2 247 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 MYLK2Q9H1R3 596 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 HES4Q9HCC6 221 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 SAR1AQ9NR31 198 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 SESN1Q9Y6P5 492 aa8.66□□□□□ -1.02
DDX41-216ENST00000513562 J3QT63 122 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 M0QZK8 103 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 ZNF737O75373 536 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 NXPH2O95156 264 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 H2BFMP0C1H6 154 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 HTR1DP28221 377 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 BRS3P32247 399 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 ECI1P42126 302 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 OR3A4PP47883 348 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 PSMA6P60900 246 aaKnown RBP8.65□□□□□ -1.02
DDX41-216ENST00000513562 MEF2CQ06413 473 aaPredicted RBP8.65□□□□□ -1.02
DDX41-216ENST00000513562 C9orf152Q5JTZ5 239 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 C9orf66Q5T8R8 295 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 ZBTB49Q6ZSB9 765 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 MEPCEQ7L2J0 689 aaKnown RBP8.65□□□□□ -1.02
DDX41-216ENST00000513562 ERI1Q8IV48 349 aaKnown RBP8.65□□□□□ -1.02
DDX41-216ENST00000513562 SBSPONQ8IVN8 264 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 ZNF676Q8N7Q3 588 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 OR8B12Q8NGG6 310 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 OR8D4Q8NGM9 314 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 FAM81AQ8TBF8 368 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms